Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.62□□□□□ -0.39
DUX4Q9UBX2 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 DUX4L47-201ENST00000566374 394 ntBASIC12.61□□□□□ -0.39
DUX4Q9UBX2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 AC018529.2-202ENST00000611482 3087 ntBASIC12.61□□□□□ -0.39
DUX4Q9UBX2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC12.61□□□□□ -0.39
DUX4Q9UBX2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 BARD1-201ENST00000260947 5499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
DUX4Q9UBX2 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms