Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL137784.3-201ENST00000623858 2288 ntBASIC13.05□□□□□ -0.32
LRFN1Q9P244 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 AP001267.2-201ENST00000532619 2086 ntBASIC13.05□□□□□ -0.32
LRFN1Q9P244 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 RPL17P11-201ENST00000417593 544 ntBASIC13.05□□□□□ -0.32
LRFN1Q9P244 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 AC104784.1-201ENST00000473096 294 ntBASIC13.05□□□□□ -0.32
LRFN1Q9P244 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 MT3-203ENST00000565838 421 ntTSL 3 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 RN7SL736P-201ENST00000613111 269 ntBASIC13.05□□□□□ -0.32
LRFN1Q9P244 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 AP001184.1-201ENST00000637936 376 ntBASIC13.05□□□□□ -0.32
LRFN1Q9P244 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 LINC00115-201ENST00000473798 1317 ntBASIC13.05□□□□□ -0.32
LRFN1Q9P244 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRFN1Q9P244 GRK6P1-201ENST00000400595 1711 ntBASIC13.05□□□□□ -0.32
LRFN1Q9P244 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
LRFN1Q9P244 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 AC140479.7-201ENST00000636301 2332 ntBASIC13.04□□□□□ -0.32
LRFN1Q9P244 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 HLA-DMA-203ENST00000395305 777 ntBASIC13.04□□□□□ -0.32
LRFN1Q9P244 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 AL512306.1-201ENST00000432698 848 ntBASIC13.04□□□□□ -0.32
LRFN1Q9P244 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 RN7SL665P-201ENST00000578793 300 ntBASIC13.04□□□□□ -0.32
LRFN1Q9P244 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 SIGLEC22P-201ENST00000599104 714 ntBASIC13.04□□□□□ -0.32
LRFN1Q9P244 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 AL133467.4-201ENST00000602953 725 ntBASIC13.04□□□□□ -0.32
LRFN1Q9P244 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 AL021707.6-201ENST00000609212 491 ntBASIC13.04□□□□□ -0.32
LRFN1Q9P244 MIR6842-201ENST00000612539 65 ntBASIC13.04□□□□□ -0.32
LRFN1Q9P244 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
LRFN1Q9P244 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRFN1Q9P244 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms