Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 JPT2-214ENST00000569765 782 ntTSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 AP000437.1-201ENST00000624057 2085 ntBASIC17.49■□□□□ 0.39
UPF2Q9HAU5 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF2Q9HAU5 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.48■□□□□ 0.39
UPF2Q9HAU5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 CICP12-201ENST00000455801 843 ntBASIC17.48■□□□□ 0.39
UPF2Q9HAU5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 AC008825.2-201ENST00000603374 718 ntBASIC17.48■□□□□ 0.39
UPF2Q9HAU5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 AL118506.1-201ENST00000601296 3082 ntBASIC17.48■□□□□ 0.39
UPF2Q9HAU5 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF2Q9HAU5 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AC134312.5-201ENST00000568031 1313 ntBASIC17.47■□□□□ 0.39
UPF2Q9HAU5 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms