Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 PPP1R2P4-201ENST00000424051 595 ntBASIC15.79■□□□□ 0.12
TRIM50Q86XT4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 AC007250.1-201ENST00000608934 338 ntBASIC15.79■□□□□ 0.12
TRIM50Q86XT4 AL132780.4-201ENST00000624870 1135 ntBASIC15.79■□□□□ 0.12
TRIM50Q86XT4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM50Q86XT4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 AL357563.1-201ENST00000404728 395 ntBASIC15.78■□□□□ 0.12
TRIM50Q86XT4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 HCG24-202ENST00000414398 717 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 AC092638.2-201ENST00000441105 947 ntBASIC15.78■□□□□ 0.12
TRIM50Q86XT4 CHCHD2P2-201ENST00000503744 321 ntBASIC15.78■□□□□ 0.12
TRIM50Q86XT4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 CICP16-201ENST00000502609 2813 ntBASIC15.78■□□□□ 0.12
TRIM50Q86XT4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 KRT8P43-201ENST00000406052 1458 ntBASIC15.78■□□□□ 0.12
TRIM50Q86XT4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM50Q86XT4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 RN7SL788P-201ENST00000460504 316 ntBASIC15.77■□□□□ 0.12
TRIM50Q86XT4 SLC25A15P3-201ENST00000505530 290 ntBASIC15.77■□□□□ 0.12
TRIM50Q86XT4 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.77■□□□□ 0.12
TRIM50Q86XT4 AC145285.5-201ENST00000562217 361 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms