Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
VPS13CQ709C8 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 RPSAP70-201ENST00000504462 864 ntBASIC11.37□□□□□ -0.59
VPS13CQ709C8 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 AC023051.2-201ENST00000541141 460 ntBASIC11.37□□□□□ -0.59
VPS13CQ709C8 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC11.37□□□□□ -0.59
VPS13CQ709C8 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 PCDHB19P-202ENST00000625133 2914 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 TUBB2BP1-201ENST00000404155 871 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 SNX20-205ENST00000610485 557 ntTSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 MIR7704-201ENST00000610524 59 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 AC015818.1-201ENST00000451011 244 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
VPS13CQ709C8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 FMO6P-201ENST00000236166 1620 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 SNRPCP15-201ENST00000424055 192 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 AC092865.2-201ENST00000439409 971 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 HNRNPA1P73-201ENST00000446472 928 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 RPL29P2-202ENST00000498671 657 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 RNA5SP288-201ENST00000516075 93 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 NEMF-210ENST00000556672 590 ntTSL 2 BASIC11.36□□□□□ -0.59
VPS13CQ709C8 MIR6165-201ENST00000614803 84 ntBASIC11.36□□□□□ -0.59
VPS13CQ709C8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AGAP10P-201ENST00000454844 2418 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AL031587.5-201ENST00000624344 1849 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VPS13CQ709C8 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 HDGF-202ENST00000368206 960 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AC103592.1-201ENST00000394513 664 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 RN7SL22P-201ENST00000471800 269 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 PAX6-247ENST00000638965 979 ntTSL 5 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 KRT8P25-201ENST00000473150 1456 ntBASIC11.35□□□□□ -0.59
VPS13CQ709C8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
VPS13CQ709C8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms