Protein–RNA interactions for Protein: P82279

CRB1, Protein crumbs homolog 1, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB1P82279 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.39■□□□□ 0.53
CRB1P82279 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CRB1P82279 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CRB1P82279 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.39■□□□□ 0.53
CRB1P82279 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CRB1P82279 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.39■□□□□ 0.53
CRB1P82279 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CRB1P82279 PHBP10-201ENST00000416467 784 ntBASIC18.39■□□□□ 0.53
CRB1P82279 FDPSP7-201ENST00000429043 1054 ntBASIC18.39■□□□□ 0.53
CRB1P82279 PGK1P2-201ENST00000431702 1214 ntBASIC18.39■□□□□ 0.53
CRB1P82279 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC18.39■□□□□ 0.53
CRB1P82279 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CRB1P82279 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC18.39■□□□□ 0.53
CRB1P82279 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC18.39■□□□□ 0.53
CRB1P82279 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC18.39■□□□□ 0.53
CRB1P82279 AC005746.3-201ENST00000614751 393 ntBASIC18.39■□□□□ 0.53
CRB1P82279 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC18.39■□□□□ 0.53
CRB1P82279 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CRB1P82279 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 Z98885.3-201ENST00000624882 1757 ntBASIC18.38■□□□□ 0.53
CRB1P82279 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 TCAM1P-207ENST00000485295 1537 ntBASIC18.38■□□□□ 0.53
CRB1P82279 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 MIR611-201ENST00000384869 67 ntBASIC18.38■□□□□ 0.53
CRB1P82279 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 AL121949.3-201ENST00000406684 385 ntBASIC18.38■□□□□ 0.53
CRB1P82279 AHCYP3-201ENST00000420053 1279 ntBASIC18.38■□□□□ 0.53
CRB1P82279 HNRNPA1P10-201ENST00000444945 962 ntBASIC18.38■□□□□ 0.53
CRB1P82279 RN7SL578P-201ENST00000477781 283 ntBASIC18.38■□□□□ 0.53
CRB1P82279 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC18.38■□□□□ 0.53
CRB1P82279 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC18.38■□□□□ 0.53
CRB1P82279 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CRB1P82279 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.38■□□□□ 0.53
CRB1P82279 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 MST1P2-201ENST00000457982 2291 ntBASIC18.37■□□□□ 0.53
CRB1P82279 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.37■□□□□ 0.53
CRB1P82279 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CRB1P82279 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CRB1P82279 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.37■□□□□ 0.53
CRB1P82279 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CRB1P82279 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CRB1P82279 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CRB1P82279 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC18.37■□□□□ 0.53
CRB1P82279 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CRB1P82279 KRT18P33-201ENST00000398525 1043 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms