Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.74□□□□□ -0.05
ERVFC1P60507 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERVFC1P60507 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ERVFC1P60507 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
ERVFC1P60507 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERVFC1P60507 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.74□□□□□ -0.05
ERVFC1P60507 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERVFC1P60507 SALL4P6-201ENST00000429385 1691 ntBASIC14.74□□□□□ -0.05
ERVFC1P60507 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERVFC1P60507 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERVFC1P60507 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ERVFC1P60507 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ERVFC1P60507 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.73□□□□□ -0.05
ERVFC1P60507 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ERVFC1P60507 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ERVFC1P60507 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ERVFC1P60507 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ERVFC1P60507 USP17L6P-201ENST00000382470 1197 ntBASIC14.73□□□□□ -0.05
ERVFC1P60507 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.73□□□□□ -0.05
ERVFC1P60507 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.73□□□□□ -0.05
ERVFC1P60507 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ERVFC1P60507 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.73□□□□□ -0.05
ERVFC1P60507 BCRP4-201ENST00000506079 804 ntBASIC14.73□□□□□ -0.05
ERVFC1P60507 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.73□□□□□ -0.05
ERVFC1P60507 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.73□□□□□ -0.05
ERVFC1P60507 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.73□□□□□ -0.05
ERVFC1P60507 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.73□□□□□ -0.05
ERVFC1P60507 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
ERVFC1P60507 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.73□□□□□ -0.05
ERVFC1P60507 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 HSPA8P5-201ENST00000456928 2069 ntBASIC14.73□□□□□ -0.05
ERVFC1P60507 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.73□□□□□ -0.05
ERVFC1P60507 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ERVFC1P60507 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
ERVFC1P60507 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
ERVFC1P60507 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.73□□□□□ -0.05
ERVFC1P60507 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
ERVFC1P60507 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ERVFC1P60507 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 SIRPB3P-201ENST00000340424 1216 ntBASIC14.72□□□□□ -0.05
ERVFC1P60507 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC14.72□□□□□ -0.05
ERVFC1P60507 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.72□□□□□ -0.05
ERVFC1P60507 SERBP1P2-201ENST00000436888 1164 ntBASIC14.72□□□□□ -0.05
ERVFC1P60507 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.72□□□□□ -0.05
ERVFC1P60507 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC14.72□□□□□ -0.05
ERVFC1P60507 AC023906.1-201ENST00000486386 453 ntBASIC14.72□□□□□ -0.05
ERVFC1P60507 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.72□□□□□ -0.05
ERVFC1P60507 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.72□□□□□ -0.05
ERVFC1P60507 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.72□□□□□ -0.05
ERVFC1P60507 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ERVFC1P60507 RN7SL605P-201ENST00000577229 281 ntBASIC14.72□□□□□ -0.05
ERVFC1P60507 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.72□□□□□ -0.05
ERVFC1P60507 MIR6816-201ENST00000620368 66 ntBASIC14.72□□□□□ -0.05
ERVFC1P60507 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.72□□□□□ -0.05
ERVFC1P60507 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms