Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPT1AP50416 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.54■□□□□ 0.08
CPT1AP50416 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPT1AP50416 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPT1AP50416 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.54■□□□□ 0.08
CPT1AP50416 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPT1AP50416 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPT1AP50416 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.53■□□□□ 0.08
CPT1AP50416 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 AC092115.1-201ENST00000566277 1402 ntBASIC15.53■□□□□ 0.08
CPT1AP50416 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.53■□□□□ 0.08
CPT1AP50416 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 PIFO-201ENST00000369737 746 ntTSL 2 BASIC15.53■□□□□ 0.08
CPT1AP50416 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.53■□□□□ 0.08
CPT1AP50416 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CPT1AP50416 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC15.53■□□□□ 0.08
CPT1AP50416 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC15.53■□□□□ 0.08
CPT1AP50416 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC15.53■□□□□ 0.08
CPT1AP50416 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.53■□□□□ 0.08
CPT1AP50416 RN7SL128P-201ENST00000467883 305 ntBASIC15.53■□□□□ 0.08
CPT1AP50416 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.53■□□□□ 0.08
CPT1AP50416 RN7SL288P-201ENST00000490496 291 ntBASIC15.53■□□□□ 0.08
CPT1AP50416 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.53■□□□□ 0.08
CPT1AP50416 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.53■□□□□ 0.08
CPT1AP50416 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.53■□□□□ 0.08
CPT1AP50416 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CPT1AP50416 AC087203.1-201ENST00000532111 1181 ntBASIC15.53■□□□□ 0.08
CPT1AP50416 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.53■□□□□ 0.08
CPT1AP50416 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.53■□□□□ 0.08
CPT1AP50416 AL139339.2-201ENST00000608063 657 ntBASIC15.53■□□□□ 0.08
CPT1AP50416 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC15.53■□□□□ 0.08
CPT1AP50416 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC15.53■□□□□ 0.08
CPT1AP50416 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC15.53■□□□□ 0.08
CPT1AP50416 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.53■□□□□ 0.08
CPT1AP50416 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CPT1AP50416 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CPT1AP50416 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPT1AP50416 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 CICP24-201ENST00000605464 2705 ntBASIC15.52■□□□□ 0.08
CPT1AP50416 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CPT1AP50416 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.52■□□□□ 0.08
CPT1AP50416 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CPT1AP50416 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.52■□□□□ 0.08
CPT1AP50416 AP001267.2-201ENST00000532619 2086 ntBASIC15.52■□□□□ 0.08
CPT1AP50416 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 PTGER4P2-201ENST00000328411 252 ntBASIC15.52■□□□□ 0.08
CPT1AP50416 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CPT1AP50416 AC022080.1-201ENST00000366255 781 ntBASIC15.52■□□□□ 0.08
CPT1AP50416 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.52■□□□□ 0.08
CPT1AP50416 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.52■□□□□ 0.08
CPT1AP50416 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.52■□□□□ 0.08
CPT1AP50416 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.52■□□□□ 0.08
CPT1AP50416 PTGER4P3-201ENST00000458150 252 ntBASIC15.52■□□□□ 0.08
CPT1AP50416 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CPT1AP50416 AC092903.1-201ENST00000466506 262 ntBASIC15.52■□□□□ 0.08
CPT1AP50416 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.52■□□□□ 0.08
CPT1AP50416 RN7SL147P-201ENST00000487345 298 ntBASIC15.52■□□□□ 0.08
CPT1AP50416 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC15.52■□□□□ 0.08
CPT1AP50416 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CPT1AP50416 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPT1AP50416 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.52■□□□□ 0.08
CPT1AP50416 AL139424.3-202ENST00000641619 917 ntBASIC15.52■□□□□ 0.08
CPT1AP50416 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
CPT1AP50416 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms