Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 RN7SL219P-201ENST00000582872 296 ntBASIC12.75□□□□□ -0.37
HLA-DOBP13765 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 MIR6752-201ENST00000618442 71 ntBASIC12.75□□□□□ -0.37
HLA-DOBP13765 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HLA-DOBP13765 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HLA-DOBP13765 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 AL731571.1-201ENST00000617058 5428 ntBASIC12.74□□□□□ -0.37
HLA-DOBP13765 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 AC103592.1-201ENST00000394513 664 ntBASIC12.74□□□□□ -0.37
HLA-DOBP13765 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 MARK2P5-201ENST00000507649 634 ntBASIC12.74□□□□□ -0.37
HLA-DOBP13765 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-DOBP13765 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DOBP13765 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 PTENP1-202ENST00000532280 3996 ntBASIC12.73□□□□□ -0.37
HLA-DOBP13765 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 LINC01815-202ENST00000641468 1409 ntBASIC12.73□□□□□ -0.37
HLA-DOBP13765 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DOBP13765 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DOBP13765 RN7SL277P-201ENST00000481521 288 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms