Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 AL022313.4-201ENST00000562756 2046 ntBASIC15.58■□□□□ 0.08
CLTAP09496 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLTAP09496 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLTAP09496 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CLTAP09496 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLTAP09496 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CLTAP09496 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
CLTAP09496 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CLTAP09496 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 BANF1P3-201ENST00000412556 261 ntBASIC15.57■□□□□ 0.08
CLTAP09496 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.57■□□□□ 0.08
CLTAP09496 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.57■□□□□ 0.08
CLTAP09496 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.57■□□□□ 0.08
CLTAP09496 IMP3P2-201ENST00000489760 475 ntBASIC15.57■□□□□ 0.08
CLTAP09496 AC008723.1-201ENST00000506922 207 ntBASIC15.57■□□□□ 0.08
CLTAP09496 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 FGFR3P5-201ENST00000564496 886 ntBASIC15.57■□□□□ 0.08
CLTAP09496 AC026803.1-201ENST00000569130 274 ntBASIC15.57■□□□□ 0.08
CLTAP09496 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 AC106872.11-201ENST00000605838 421 ntBASIC15.57■□□□□ 0.08
CLTAP09496 AC079336.7-201ENST00000623428 1078 ntBASIC15.57■□□□□ 0.08
CLTAP09496 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 AC089987.1-201ENST00000551654 2209 ntBASIC15.57■□□□□ 0.08
CLTAP09496 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.57■□□□□ 0.08
CLTAP09496 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 AC027612.1-201ENST00000445234 2395 ntBASIC15.57■□□□□ 0.08
CLTAP09496 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 TCAM1P-207ENST00000485295 1537 ntBASIC15.57■□□□□ 0.08
CLTAP09496 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLTAP09496 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLTAP09496 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
CLTAP09496 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.56■□□□□ 0.08
CLTAP09496 RPS9P1-201ENST00000419943 583 ntBASIC15.56■□□□□ 0.08
CLTAP09496 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.56■□□□□ 0.08
CLTAP09496 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 AL512310.5-201ENST00000551999 515 ntBASIC15.56■□□□□ 0.08
CLTAP09496 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 KRT8P1-201ENST00000557533 1207 ntBASIC15.56■□□□□ 0.08
CLTAP09496 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms