Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
APPP05067 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APPP05067 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
APPP05067 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
APPP05067 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
APPP05067 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
APPP05067 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.08■□□□□ 0.33
APPP05067 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
APPP05067 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
APPP05067 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
APPP05067 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.08■□□□□ 0.33
APPP05067 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.08■□□□□ 0.33
APPP05067 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
APPP05067 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.08■□□□□ 0.32
APPP05067 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.08■□□□□ 0.32
APPP05067 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 KRT17P5-201ENST00000332088 839 ntBASIC17.08■□□□□ 0.32
APPP05067 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 UPF3AP2-201ENST00000457924 1132 ntBASIC17.08■□□□□ 0.32
APPP05067 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.08■□□□□ 0.32
APPP05067 AC116345.2-201ENST00000512837 523 ntBASIC17.08■□□□□ 0.32
APPP05067 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.08■□□□□ 0.32
APPP05067 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.08■□□□□ 0.32
APPP05067 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
APPP05067 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.08■□□□□ 0.32
APPP05067 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC17.08■□□□□ 0.32
APPP05067 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
APPP05067 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APPP05067 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
APPP05067 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.08■□□□□ 0.32
APPP05067 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
APPP05067 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.07■□□□□ 0.32
APPP05067 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.07■□□□□ 0.32
APPP05067 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
APPP05067 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
APPP05067 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
APPP05067 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.07■□□□□ 0.32
APPP05067 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.07■□□□□ 0.32
APPP05067 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
APPP05067 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.07■□□□□ 0.32
APPP05067 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 KRT18P9-201ENST00000604826 1300 ntBASIC17.07■□□□□ 0.32
APPP05067 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APPP05067 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.07■□□□□ 0.32
APPP05067 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.07■□□□□ 0.32
APPP05067 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.07■□□□□ 0.32
APPP05067 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.07■□□□□ 0.32
APPP05067 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.07■□□□□ 0.32
APPP05067 AC026803.1-201ENST00000569130 274 ntBASIC17.07■□□□□ 0.32
APPP05067 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.07■□□□□ 0.32
APPP05067 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
APPP05067 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.07■□□□□ 0.32
APPP05067 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.07■□□□□ 0.32
APPP05067 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
APPP05067 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.07■□□□□ 0.32
APPP05067 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
APPP05067 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
APPP05067 LINC01815-202ENST00000641468 1409 ntBASIC17.06■□□□□ 0.32
APPP05067 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APPP05067 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms