Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 REXO1L6P-201ENST00000603433 1515 ntBASIC10.72□□□□□ -0.69
LTAP01374 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
LTAP01374 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC10.72□□□□□ -0.69
LTAP01374 AC022364.1-202ENST00000617468 2409 ntBASIC10.72□□□□□ -0.69
LTAP01374 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
LTAP01374 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
LTAP01374 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
LTAP01374 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.71□□□□□ -0.69
LTAP01374 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC10.71□□□□□ -0.69
LTAP01374 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC10.71□□□□□ -0.69
LTAP01374 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC10.71□□□□□ -0.69
LTAP01374 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC10.71□□□□□ -0.69
LTAP01374 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.71□□□□□ -0.69
LTAP01374 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
LTAP01374 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC10.71□□□□□ -0.69
LTAP01374 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
LTAP01374 AC123567.1-201ENST00000548294 1261 ntBASIC10.71□□□□□ -0.69
LTAP01374 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC10.71□□□□□ -0.69
LTAP01374 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.71□□□□□ -0.69
LTAP01374 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.71□□□□□ -0.69
LTAP01374 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
LTAP01374 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
LTAP01374 AC145423.3-201ENST00000615987 467 ntBASIC10.71□□□□□ -0.69
LTAP01374 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
LTAP01374 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC10.71□□□□□ -0.7
LTAP01374 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC10.71□□□□□ -0.7
LTAP01374 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
LTAP01374 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.7□□□□□ -0.7
LTAP01374 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LTAP01374 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
LTAP01374 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LTAP01374 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LTAP01374 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LTAP01374 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.7□□□□□ -0.7
LTAP01374 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms