Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.16■□□□□ 0.02
O00370 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.16■□□□□ 0.02
O00370 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
O00370 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.16■□□□□ 0.02
O00370 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 SHMT1P1-201ENST00000419974 1312 ntBASIC15.16■□□□□ 0.02
O00370 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
O00370 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
O00370 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.15■□□□□ 0.02
O00370 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
O00370 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
O00370 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.15■□□□□ 0.02
O00370 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.15■□□□□ 0.02
O00370 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
O00370 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 CYP46A4P-201ENST00000414953 267 ntBASIC15.15■□□□□ 0.02
O00370 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 ISCA2P1-201ENST00000425548 448 ntBASIC15.15■□□□□ 0.02
O00370 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 CALR4P-201ENST00000431943 946 ntBASIC15.15■□□□□ 0.02
O00370 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.15■□□□□ 0.02
O00370 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.15■□□□□ 0.02
O00370 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.15■□□□□ 0.02
O00370 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.15■□□□□ 0.02
O00370 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.15■□□□□ 0.02
O00370 AC091544.8-201ENST00000619490 361 ntBASIC15.15■□□□□ 0.02
O00370 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
O00370 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 AL928654.5-201ENST00000624831 2501 ntBASIC15.15■□□□□ 0.02
O00370 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.15■□□□□ 0.02
O00370 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.15■□□□□ 0.02
O00370 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.15■□□□□ 0.02
O00370 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 BRD7P5-201ENST00000299197 1822 ntBASIC15.15■□□□□ 0.02
O00370 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
O00370 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
O00370 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.14■□□□□ 0.01
O00370 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
O00370 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
O00370 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
O00370 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
O00370 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.14■□□□□ 0.01
O00370 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.14■□□□□ 0.01
O00370 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
O00370 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
O00370 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
O00370 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 RPS9P1-201ENST00000419943 583 ntBASIC15.14■□□□□ 0.01
O00370 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 RN7SL530P-201ENST00000485097 298 ntBASIC15.14■□□□□ 0.01
O00370 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 ACTG1P17-201ENST00000558391 1119 ntBASIC15.14■□□□□ 0.01
O00370 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
O00370 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
O00370 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
O00370 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.14■□□□□ 0.01
O00370 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.14■□□□□ 0.01
O00370 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms