Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 AC005777.1-201ENST00000588332 187 ntBASIC21.81■■□□□ 1.08
ARID3CA6NKF2 MIR6074-201ENST00000612054 107 ntBASIC21.81■■□□□ 1.08
ARID3CA6NKF2 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 HSPA8P5-201ENST00000456928 2069 ntBASIC21.81■■□□□ 1.08
ARID3CA6NKF2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 FGD5P1-202ENST00000614866 2498 ntBASIC21.81■■□□□ 1.08
ARID3CA6NKF2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ARID3CA6NKF2 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 DDC-204ENST00000426377 1700 ntTSL 3 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 SALL4P6-201ENST00000429385 1691 ntBASIC21.8■■□□□ 1.08
ARID3CA6NKF2 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 ACTBP14-201ENST00000411655 1089 ntBASIC21.8■■□□□ 1.08
ARID3CA6NKF2 AC103563.1-201ENST00000429316 123 ntBASIC21.8■■□□□ 1.08
ARID3CA6NKF2 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 SRP14-208ENST00000560773 468 ntTSL 3 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ARID3CA6NKF2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 AC097359.2-201ENST00000604992 2389 ntBASIC21.79■■□□□ 1.08
ARID3CA6NKF2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 SIRPB3P-201ENST00000340424 1216 ntBASIC21.79■■□□□ 1.08
ARID3CA6NKF2 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 NQO2-204ENST00000380454 851 ntTSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 TREX1-203ENST00000456089 629 ntTSL 3 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 AC113347.2-201ENST00000512350 279 ntBASIC21.79■■□□□ 1.08
ARID3CA6NKF2 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 PMEL-214ENST00000550447 901 ntTSL 3 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 AC090510.3-201ENST00000615831 821 ntBASIC21.79■■□□□ 1.08
ARID3CA6NKF2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 AL513477.1-201ENST00000602865 2407 ntBASIC21.79■■□□□ 1.08
ARID3CA6NKF2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ARID3CA6NKF2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC21.78■■□□□ 1.08
ARID3CA6NKF2 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms