Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC11.77□□□□□ -0.53
A0A1W2PRF3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
A0A1W2PRF3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
A0A1W2PRF3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
A0A1W2PRF3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
A0A1W2PRF3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 AL805961.2-201ENST00000642139 4817 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 RNA5SP359-201ENST00000364838 113 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 TSPY25P-201ENST00000429463 745 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 XBP1P1-201ENST00000436573 652 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 UPF3AP2-201ENST00000457924 1132 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 RN7SL277P-201ENST00000481521 288 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 RTN3P1-201ENST00000536295 711 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 RN7SL574P-201ENST00000581512 297 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 AC020922.3-201ENST00000595064 547 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 AL109837.1-201ENST00000603272 613 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 AC012044.1-201ENST00000603431 297 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 AC021016.3-201ENST00000608367 477 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 AC007718.1-201ENST00000621078 280 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 FRMPD2B-201ENST00000431305 1347 ntBASIC11.76□□□□□ -0.53
A0A1W2PRF3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
A0A1W2PRF3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.76□□□□□ -0.53
A0A1W2PRF3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
A0A1W2PRF3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
A0A1W2PRF3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.75□□□□□ -0.53
A0A1W2PRF3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
A0A1W2PRF3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.75□□□□□ -0.53
A0A1W2PRF3 AC005252.3-201ENST00000623855 2258 ntBASIC11.75□□□□□ -0.53
A0A1W2PRF3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.75□□□□□ -0.53
A0A1W2PRF3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
A0A1W2PRF3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms