Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 AC006504.5-208ENST00000588784 2401 ntBASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA1Q9UND3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 AL583805.1-201ENST00000391389 531 ntBASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 KRT18P36-201ENST00000411618 1276 ntBASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 AC098935.1-201ENST00000446057 611 ntBASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 RN7SL181P-201ENST00000462921 277 ntBASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA1Q9UND3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AL590440.2-201ENST00000641973 1595 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 KRT18P9-201ENST00000604826 1300 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AC092978.1-202ENST00000637590 1327 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms