Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 HSPA8P5-201ENST00000456928 2069 ntBASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PPARGC1AQ9UBK2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 PPT1-213ENST00000641319 2388 ntBASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 AL157813.1-201ENST00000612996 587 ntBASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PPARGC1AQ9UBK2 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AC016397.2-201ENST00000624848 1985 ntBASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 MIR3188-201ENST00000583494 85 ntBASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 GPR182-203ENST00000622922 591 ntBASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 TCAM1P-207ENST00000485295 1537 ntBASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PPARGC1AQ9UBK2 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PPARGC1AQ9UBK2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.85□□□□□ -0.03
PPARGC1AQ9UBK2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPARGC1AQ9UBK2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PPARGC1AQ9UBK2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PPARGC1AQ9UBK2 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms