Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC093700.1-201ENST00000503348 717 ntBASIC15.9■□□□□ 0.14
PTPN18Q99952 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN18Q99952 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN18Q99952 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN18Q99952 OR4A49P-201ENST00000527050 632 ntBASIC15.9■□□□□ 0.14
PTPN18Q99952 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN18Q99952 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN18Q99952 ABCC6P1-203ENST00000565566 1170 ntBASIC15.9■□□□□ 0.14
PTPN18Q99952 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTPN18Q99952 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN18Q99952 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN18Q99952 PSME2-217ENST00000615264 874 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN18Q99952 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN18Q99952 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN18Q99952 PSME2-218ENST00000630027 185 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN18Q99952 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN18Q99952 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PTPN18Q99952 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN18Q99952 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PTPN18Q99952 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PTPN18Q99952 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN18Q99952 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTPN18Q99952 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN18Q99952 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN18Q99952 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN18Q99952 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN18Q99952 GUCY2EP-203ENST00000531117 1918 ntBASIC15.9■□□□□ 0.14
PTPN18Q99952 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN18Q99952 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PTPN18Q99952 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 AC090505.1-201ENST00000430515 1834 ntBASIC15.89■□□□□ 0.13
PTPN18Q99952 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PTPN18Q99952 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 ASS1P1-201ENST00000402854 1237 ntBASIC15.89■□□□□ 0.13
PTPN18Q99952 AL356000.1-201ENST00000441073 1238 ntBASIC15.89■□□□□ 0.13
PTPN18Q99952 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN18Q99952 RN7SL838P-201ENST00000481676 295 ntBASIC15.89■□□□□ 0.13
PTPN18Q99952 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN18Q99952 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN18Q99952 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC15.89■□□□□ 0.13
PTPN18Q99952 MYL6-215ENST00000549566 685 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN18Q99952 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PTPN18Q99952 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PTPN18Q99952 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTPN18Q99952 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTPN18Q99952 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN18Q99952 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.89■□□□□ 0.13
PTPN18Q99952 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTPN18Q99952 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
PTPN18Q99952 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN18Q99952 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN18Q99952 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN18Q99952 PTN-202ENST00000393083 1599 ntTSL 5 BASIC15.88■□□□□ 0.13
PTPN18Q99952 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.88■□□□□ 0.13
PTPN18Q99952 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN18Q99952 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN18Q99952 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN18Q99952 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN18Q99952 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTPN18Q99952 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PTPN18Q99952 DNM1P46-202ENST00000415963 882 ntBASIC15.88■□□□□ 0.13
PTPN18Q99952 AC000077.1-201ENST00000420012 953 ntBASIC15.88■□□□□ 0.13
PTPN18Q99952 CD37-203ENST00000426897 1204 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN18Q99952 HMGA1P2-201ENST00000430198 324 ntBASIC15.88■□□□□ 0.13
PTPN18Q99952 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN18Q99952 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN18Q99952 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PTPN18Q99952 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN18Q99952 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC15.88■□□□□ 0.13
PTPN18Q99952 CLPP-205ENST00000596605 646 ntTSL 2 BASIC15.88■□□□□ 0.13
PTPN18Q99952 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms