Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC009452.1-201ENST00000640823 606 ntBASIC14.45□□□□□ -0.1
HLA-CQ95604 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-CQ95604 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-CQ95604 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-CQ95604 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-CQ95604 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-CQ95604 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-CQ95604 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-CQ95604 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 KRT8P38-201ENST00000441370 1430 ntBASIC14.44□□□□□ -0.1
HLA-CQ95604 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-CQ95604 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
HLA-CQ95604 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HLA-CQ95604 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-CQ95604 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
HLA-CQ95604 WDR54-202ENST00000409791 854 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-CQ95604 AC041040.1-201ENST00000425197 460 ntBASIC14.44□□□□□ -0.1
HLA-CQ95604 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-CQ95604 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 RNA5SP420-201ENST00000516997 137 ntBASIC14.44□□□□□ -0.1
HLA-CQ95604 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-CQ95604 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-CQ95604 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-CQ95604 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-CQ95604 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
HLA-CQ95604 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
HLA-CQ95604 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 Z98885.3-201ENST00000624882 1757 ntBASIC14.44□□□□□ -0.1
HLA-CQ95604 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-CQ95604 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-CQ95604 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-CQ95604 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HLA-CQ95604 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-CQ95604 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-CQ95604 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC106785.2-201ENST00000564385 1319 ntBASIC14.43□□□□□ -0.1
HLA-CQ95604 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 HYMAI-201ENST00000635591 3347 ntBASIC14.43□□□□□ -0.1
HLA-CQ95604 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-CQ95604 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HLA-CQ95604 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-CQ95604 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-CQ95604 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-CQ95604 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-CQ95604 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HLA-CQ95604 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-CQ95604 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC079250.1-201ENST00000456046 531 ntBASIC14.43□□□□□ -0.1
HLA-CQ95604 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-CQ95604 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-CQ95604 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-CQ95604 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC14.43□□□□□ -0.1
HLA-CQ95604 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-CQ95604 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC138627.1-201ENST00000641127 1257 ntBASIC14.43□□□□□ -0.1
HLA-CQ95604 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-CQ95604 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-CQ95604 AC097474.1-201ENST00000506481 1371 ntBASIC14.43□□□□□ -0.1
HLA-CQ95604 CASC19-229ENST00000641418 1373 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms