Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH19Q8TAB3 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 KRT8P21-201ENST00000430398 1491 ntBASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 GOLGA2P8-201ENST00000505201 779 ntBASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 AC138649.2-201ENST00000615886 705 ntBASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 AC135782.3-201ENST00000562782 2105 ntBASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH19Q8TAB3 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.65□□□□□ -0.07
PCDH19Q8TAB3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 RPS9P1-201ENST00000419943 583 ntBASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 NDUFV2P1-201ENST00000596415 907 ntBASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH19Q8TAB3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms