Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SCUBE3Q8IX30 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 RPL13AP3-202ENST00000494676 1473 ntBASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 EIF2S2P5-201ENST00000457635 968 ntBASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 AC108673.2-201ENST00000608909 565 ntBASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.97□□□□□ -0.01
SCUBE3Q8IX30 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 AL590824.1-201ENST00000403828 1349 ntBASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 YY1P1-201ENST00000427625 668 ntBASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 RN7SL769P-201ENST00000469386 295 ntBASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 TMEM198B-204ENST00000484016 896 ntBASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 AL161670.2-201ENST00000557650 1227 ntBASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 MIR3619-201ENST00000579667 83 ntBASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 MIR4706-201ENST00000582134 82 ntBASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 AC010327.5-201ENST00000586923 3061 ntBASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SCUBE3Q8IX30 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms