Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.38□□□□□ -0.59
FAM78BQ5VT40 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
FAM78BQ5VT40 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 LINC00567-201ENST00000569854 3409 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 BRI3BPP1-201ENST00000594224 787 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AC004233.3-201ENST00000607794 1269 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AJ011932.1-201ENST00000621707 465 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AP001002.3-201ENST00000623482 206 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 SLC7A15P-201ENST00000424028 1363 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AC011481.3-201ENST00000623895 5594 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 POM121L14P-201ENST00000406100 1558 ntBASIC11.37□□□□□ -0.59
FAM78BQ5VT40 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
FAM78BQ5VT40 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 AL022313.4-201ENST00000562756 2046 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
FAM78BQ5VT40 AL031719.1-201ENST00000623365 2587 ntBASIC11.36□□□□□ -0.59
FAM78BQ5VT40 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms