Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 AC211486.1-202ENST00000416371 468 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 CNN2P11-201ENST00000429351 262 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.04□□□□□ -0.48
SSBP1Q04837 CICP12-201ENST00000455801 843 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 AC211476.1-201ENST00000503899 468 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 DOC2GP-202ENST00000514950 1163 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 AC109322.1-201ENST00000524499 1264 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.04□□□□□ -0.48
SSBP1Q04837 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SSBP1Q04837 AC025678.2-201ENST00000562061 970 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.04□□□□□ -0.48
SSBP1Q04837 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.04□□□□□ -0.48
SSBP1Q04837 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.04□□□□□ -0.48
SSBP1Q04837 RPSAP52-203ENST00000622976 1023 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 AC009093.2-202ENST00000620513 2079 ntBASIC12.04□□□□□ -0.48
SSBP1Q04837 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.04□□□□□ -0.48
SSBP1Q04837 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SSBP1Q04837 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SSBP1Q04837 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SSBP1Q04837 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.03□□□□□ -0.48
SSBP1Q04837 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SSBP1Q04837 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SSBP1Q04837 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.03□□□□□ -0.48
SSBP1Q04837 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
SSBP1Q04837 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.03□□□□□ -0.48
SSBP1Q04837 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.03□□□□□ -0.48
SSBP1Q04837 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.03□□□□□ -0.48
SSBP1Q04837 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SSBP1Q04837 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.03□□□□□ -0.48
SSBP1Q04837 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
SSBP1Q04837 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.03□□□□□ -0.48
SSBP1Q04837 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.03□□□□□ -0.48
SSBP1Q04837 AC008738.7-201ENST00000609744 511 ntBASIC12.03□□□□□ -0.48
SSBP1Q04837 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.03□□□□□ -0.48
SSBP1Q04837 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SSBP1Q04837 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SSBP1Q04837 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SSBP1Q04837 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.03□□□□□ -0.48
SSBP1Q04837 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP1Q04837 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP1Q04837 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP1Q04837 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP1Q04837 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
SSBP1Q04837 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SSBP1Q04837 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP1Q04837 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP1Q04837 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP1Q04837 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.02□□□□□ -0.48
SSBP1Q04837 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12.02□□□□□ -0.48
SSBP1Q04837 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.02□□□□□ -0.48
SSBP1Q04837 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.02□□□□□ -0.48
SSBP1Q04837 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SSBP1Q04837 AC018445.4-201ENST00000624066 2291 ntBASIC12.02□□□□□ -0.49
SSBP1Q04837 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.02□□□□□ -0.49
SSBP1Q04837 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SSBP1Q04837 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms