Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
EFNB1P98172 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 AHCYP4-201ENST00000419201 1315 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 AHCYP2-201ENST00000430630 1300 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 AL139158.3-201ENST00000641212 1562 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNB1P98172 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
EFNB1P98172 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNB1P98172 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
EFNB1P98172 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 AC087386.2-201ENST00000623212 4637 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
EFNB1P98172 AP006294.1-201ENST00000415407 339 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 POM121L10P-201ENST00000436994 1285 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNB1P98172 TTTY23B-201ENST00000442790 549 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.65□□□□□ -0.38
EFNB1P98172 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.65□□□□□ -0.38
EFNB1P98172 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.65□□□□□ -0.38
EFNB1P98172 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.65□□□□□ -0.38
EFNB1P98172 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
EFNB1P98172 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.65□□□□□ -0.38
EFNB1P98172 BTNL10-201ENST00000595971 695 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 AL355385.1-201ENST00000606123 409 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 AL096865.1-201ENST00000606796 927 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 AC133540.1-201ENST00000620845 1019 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 AL162426.1-201ENST00000624141 743 ntBASIC12.65□□□□□ -0.38
EFNB1P98172 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNB1P98172 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.65□□□□□ -0.38
EFNB1P98172 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
EFNB1P98172 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
EFNB1P98172 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
EFNB1P98172 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
EFNB1P98172 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
EFNB1P98172 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 HSPA8P9-201ENST00000485881 1943 ntBASIC12.64□□□□□ -0.39
EFNB1P98172 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms