Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP4BP1P59074 TMBIM7P-202ENST00000641474 1516 ntBASIC16.35■□□□□ 0.21
CHMP4BP1P59074 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 AC103810.10-201ENST00000606504 343 ntBASIC16.34■□□□□ 0.21
CHMP4BP1P59074 AC018635.2-201ENST00000608625 364 ntBASIC16.34■□□□□ 0.21
CHMP4BP1P59074 RN7SL736P-201ENST00000613111 269 ntBASIC16.34■□□□□ 0.21
CHMP4BP1P59074 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP4BP1P59074 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 COL6A4P2-202ENST00000504443 2753 ntBASIC16.33■□□□□ 0.21
CHMP4BP1P59074 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP4BP1P59074 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 AC026316.1-201ENST00000398900 414 ntBASIC16.33■□□□□ 0.2
CHMP4BP1P59074 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 RPS9P1-201ENST00000419943 583 ntBASIC16.33■□□□□ 0.2
CHMP4BP1P59074 AC078991.1-201ENST00000437297 610 ntBASIC16.33■□□□□ 0.2
CHMP4BP1P59074 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 AC135983.4-201ENST00000564116 1262 ntBASIC16.33■□□□□ 0.2
CHMP4BP1P59074 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 AC131212.3-201ENST00000624087 4219 ntBASIC16.33■□□□□ 0.2
CHMP4BP1P59074 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP4BP1P59074 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms