Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.62■□□□□ 0.09
PMS1P54277 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PMS1P54277 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PMS1P54277 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PMS1P54277 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.61■□□□□ 0.09
PMS1P54277 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 FMO6P-201ENST00000236166 1620 ntBASIC15.61■□□□□ 0.09
PMS1P54277 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 AL445209.1-201ENST00000607269 3491 ntBASIC15.61■□□□□ 0.09
PMS1P54277 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 DPM3-202ENST00000368399 517 ntBASIC15.61■□□□□ 0.09
PMS1P54277 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.61■□□□□ 0.09
PMS1P54277 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.61■□□□□ 0.09
PMS1P54277 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.61■□□□□ 0.09
PMS1P54277 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.61■□□□□ 0.09
PMS1P54277 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.61■□□□□ 0.09
PMS1P54277 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
PMS1P54277 RN7SL277P-201ENST00000481521 288 ntBASIC15.61■□□□□ 0.09
PMS1P54277 AC009779.1-201ENST00000551138 283 ntBASIC15.61■□□□□ 0.09
PMS1P54277 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
PMS1P54277 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.61■□□□□ 0.09
PMS1P54277 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.61■□□□□ 0.09
PMS1P54277 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.61■□□□□ 0.09
PMS1P54277 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PMS1P54277 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
PMS1P54277 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.61■□□□□ 0.09
PMS1P54277 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PMS1P54277 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 LINC01165-201ENST00000445190 1623 ntBASIC15.61■□□□□ 0.09
PMS1P54277 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.61■□□□□ 0.09
PMS1P54277 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.61■□□□□ 0.09
PMS1P54277 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PMS1P54277 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 AC125807.2-201ENST00000513358 3514 ntBASIC15.6■□□□□ 0.09
PMS1P54277 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PMS1P54277 CR383656.2-201ENST00000548656 2254 ntBASIC15.6■□□□□ 0.09
PMS1P54277 AC025183.3-201ENST00000623526 1482 ntBASIC15.6■□□□□ 0.09
PMS1P54277 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
PMS1P54277 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
PMS1P54277 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.6■□□□□ 0.09
PMS1P54277 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.6■□□□□ 0.09
PMS1P54277 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.6■□□□□ 0.09
PMS1P54277 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PMS1P54277 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
PMS1P54277 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PMS1P54277 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.6■□□□□ 0.09
PMS1P54277 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PMS1P54277 AL391647.1-201ENST00000395664 511 ntBASIC15.6■□□□□ 0.09
PMS1P54277 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.6■□□□□ 0.09
PMS1P54277 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.6■□□□□ 0.09
PMS1P54277 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.6■□□□□ 0.09
PMS1P54277 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms