Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.82□□□□□ -0.04
MMP13P45452 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.82□□□□□ -0.04
MMP13P45452 AC007663.3-201ENST00000609632 465 ntBASIC14.82□□□□□ -0.04
MMP13P45452 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.82□□□□□ -0.04
MMP13P45452 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.82□□□□□ -0.04
MMP13P45452 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.82□□□□□ -0.04
MMP13P45452 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
MMP13P45452 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 CES1P1-201ENST00000421606 1704 ntBASIC14.82□□□□□ -0.04
MMP13P45452 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.82□□□□□ -0.04
MMP13P45452 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
MMP13P45452 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.82□□□□□ -0.04
MMP13P45452 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MMP13P45452 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MMP13P45452 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.81□□□□□ -0.04
MMP13P45452 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MMP13P45452 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.81□□□□□ -0.04
MMP13P45452 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
MMP13P45452 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MMP13P45452 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.81□□□□□ -0.04
MMP13P45452 AC136604.1-202ENST00000425471 771 ntBASIC14.81□□□□□ -0.04
MMP13P45452 AC006122.1-201ENST00000493323 440 ntBASIC14.81□□□□□ -0.04
MMP13P45452 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.81□□□□□ -0.04
MMP13P45452 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.81□□□□□ -0.04
MMP13P45452 AL160314.3-201ENST00000556041 767 ntBASIC14.81□□□□□ -0.04
MMP13P45452 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.81□□□□□ -0.04
MMP13P45452 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 AP000437.1-201ENST00000624057 2085 ntBASIC14.81□□□□□ -0.04
MMP13P45452 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 MKRN5P-201ENST00000445263 1467 ntBASIC14.81□□□□□ -0.04
MMP13P45452 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.81□□□□□ -0.04
MMP13P45452 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.81□□□□□ -0.04
MMP13P45452 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 AC144522.1-201ENST00000625111 1658 ntBASIC14.81□□□□□ -0.04
MMP13P45452 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MMP13P45452 MARK2P9-201ENST00000430958 1727 ntBASIC14.8□□□□□ -0.04
MMP13P45452 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.8□□□□□ -0.04
MMP13P45452 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
MMP13P45452 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.8□□□□□ -0.04
MMP13P45452 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.8□□□□□ -0.04
MMP13P45452 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 PFN1P12-201ENST00000455938 534 ntBASIC14.8□□□□□ -0.04
MMP13P45452 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.8□□□□□ -0.04
MMP13P45452 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.8□□□□□ -0.04
MMP13P45452 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.8□□□□□ -0.04
MMP13P45452 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.8□□□□□ -0.04
MMP13P45452 AC005324.6-201ENST00000587972 613 ntBASIC14.8□□□□□ -0.04
MMP13P45452 AC008805.1-201ENST00000590892 364 ntBASIC14.8□□□□□ -0.04
MMP13P45452 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.8□□□□□ -0.04
MMP13P45452 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
MMP13P45452 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms