Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CTSBP07858 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CTSBP07858 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 AC138761.6-201ENST00000583997 1423 ntBASIC13.37□□□□□ -0.27
CTSBP07858 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.37□□□□□ -0.27
CTSBP07858 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.37□□□□□ -0.27
CTSBP07858 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 PDXDC2P-206ENST00000534700 1315 ntBASIC13.37□□□□□ -0.27
CTSBP07858 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.37□□□□□ -0.27
CTSBP07858 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSBP07858 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.36□□□□□ -0.27
CTSBP07858 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CTSBP07858 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 AC019109.1-201ENST00000401725 1874 ntBASIC13.36□□□□□ -0.27
CTSBP07858 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CTSBP07858 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CTSBP07858 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
CTSBP07858 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.36□□□□□ -0.27
CTSBP07858 RPL3P2-204ENST00000413027 1203 ntBASIC13.36□□□□□ -0.27
CTSBP07858 HCG24-202ENST00000414398 717 ntTSL 3 BASIC13.36□□□□□ -0.27
CTSBP07858 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CTSBP07858 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.36□□□□□ -0.27
CTSBP07858 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC13.36□□□□□ -0.27
CTSBP07858 AC018638.5-201ENST00000450885 754 ntBASIC13.36□□□□□ -0.27
CTSBP07858 AC079112.1-201ENST00000454972 939 ntBASIC13.36□□□□□ -0.27
CTSBP07858 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.36□□□□□ -0.27
CTSBP07858 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CTSBP07858 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.36□□□□□ -0.27
CTSBP07858 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 AC068867.1-201ENST00000559855 150 ntBASIC13.36□□□□□ -0.27
CTSBP07858 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.36□□□□□ -0.27
CTSBP07858 MIR4265-201ENST00000582152 99 ntBASIC13.36□□□□□ -0.27
CTSBP07858 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CTSBP07858 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.36□□□□□ -0.27
CTSBP07858 MIR7845-201ENST00000618396 99 ntBASIC13.36□□□□□ -0.27
CTSBP07858 AC091769.1-201ENST00000619576 568 ntBASIC13.36□□□□□ -0.27
CTSBP07858 AL161773.1-201ENST00000624845 863 ntBASIC13.36□□□□□ -0.27
CTSBP07858 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.36□□□□□ -0.27
CTSBP07858 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CTSBP07858 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.36□□□□□ -0.27
CTSBP07858 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.36□□□□□ -0.27
CTSBP07858 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 C8orf49-201ENST00000525043 1968 ntBASIC13.36□□□□□ -0.27
CTSBP07858 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSBP07858 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 RCC2P1-201ENST00000452257 1476 ntBASIC13.36□□□□□ -0.27
CTSBP07858 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSBP07858 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CTSBP07858 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CTSBP07858 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms