Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOEP02649 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
APOEP02649 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.94□□□□□ -0.02
APOEP02649 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
APOEP02649 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.94□□□□□ -0.02
APOEP02649 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.94□□□□□ -0.02
APOEP02649 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.94□□□□□ -0.02
APOEP02649 ISCA2P1-201ENST00000425548 448 ntBASIC14.94□□□□□ -0.02
APOEP02649 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.94□□□□□ -0.02
APOEP02649 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.94□□□□□ -0.02
APOEP02649 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.94□□□□□ -0.02
APOEP02649 TMEM198B-204ENST00000484016 896 ntBASIC14.94□□□□□ -0.02
APOEP02649 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
APOEP02649 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
APOEP02649 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.94□□□□□ -0.02
APOEP02649 AP001505.2-201ENST00000616815 443 ntBASIC14.94□□□□□ -0.02
APOEP02649 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.94□□□□□ -0.02
APOEP02649 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.94□□□□□ -0.02
APOEP02649 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.94□□□□□ -0.02
APOEP02649 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
APOEP02649 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
APOEP02649 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 FRMPD2B-201ENST00000431305 1347 ntBASIC14.93□□□□□ -0.02
APOEP02649 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
APOEP02649 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 HSPA8P5-201ENST00000456928 2069 ntBASIC14.93□□□□□ -0.02
APOEP02649 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 AC092580.1-201ENST00000433998 658 ntBASIC14.93□□□□□ -0.02
APOEP02649 AC006335.1-201ENST00000445200 547 ntBASIC14.93□□□□□ -0.02
APOEP02649 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.93□□□□□ -0.02
APOEP02649 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.93□□□□□ -0.02
APOEP02649 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.93□□□□□ -0.02
APOEP02649 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
APOEP02649 AL161670.2-201ENST00000557650 1227 ntBASIC14.93□□□□□ -0.02
APOEP02649 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.93□□□□□ -0.02
APOEP02649 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.93□□□□□ -0.02
APOEP02649 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.93□□□□□ -0.02
APOEP02649 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.93□□□□□ -0.02
APOEP02649 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.93□□□□□ -0.02
APOEP02649 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.93□□□□□ -0.02
APOEP02649 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 AC008132.1-202ENST00000342005 1389 ntBASIC14.93□□□□□ -0.02
APOEP02649 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
APOEP02649 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
APOEP02649 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
APOEP02649 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
APOEP02649 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APOEP02649 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
APOEP02649 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.92□□□□□ -0.02
APOEP02649 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
APOEP02649 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
APOEP02649 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
APOEP02649 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.92□□□□□ -0.02
APOEP02649 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
APOEP02649 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms