Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.74□□□□□ -0.37
CNOT4O95628 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.74□□□□□ -0.37
CNOT4O95628 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CNOT4O95628 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 AC008132.1-202ENST00000342005 1389 ntBASIC12.73□□□□□ -0.37
CNOT4O95628 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.73□□□□□ -0.37
CNOT4O95628 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.73□□□□□ -0.37
CNOT4O95628 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.73□□□□□ -0.37
CNOT4O95628 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC12.73□□□□□ -0.37
CNOT4O95628 NUP210P1-202ENST00000504322 710 ntBASIC12.73□□□□□ -0.37
CNOT4O95628 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.73□□□□□ -0.37
CNOT4O95628 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
CNOT4O95628 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.73□□□□□ -0.37
CNOT4O95628 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
CNOT4O95628 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
CNOT4O95628 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 AC092299.1-201ENST00000632679 757 ntBASIC12.73□□□□□ -0.37
CNOT4O95628 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CNOT4O95628 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 AC073957.3-201ENST00000609998 6758 ntBASIC12.73□□□□□ -0.37
CNOT4O95628 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CNOT4O95628 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CNOT4O95628 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 AC092053.3-201ENST00000641308 4975 ntBASIC12.72□□□□□ -0.37
CNOT4O95628 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CNOT4O95628 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CNOT4O95628 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.72□□□□□ -0.37
CNOT4O95628 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms