Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 CYP4F23P-201ENST00000593402 1579 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 AC089987.1-201ENST00000551654 2209 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 DPM3-202ENST00000368399 517 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 AC006033.1-201ENST00000440505 426 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 PGAM1P5-201ENST00000548011 764 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 AC243960.2-201ENST00000600996 747 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 AL139385.1-201ENST00000611744 3272 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 HSPA8P5-201ENST00000456928 2069 ntBASIC14.32□□□□□ -0.12
CFAP99D6REC4 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFAP99D6REC4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CFAP99D6REC4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 PPT1-213ENST00000641319 2388 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 USP17L6P-201ENST00000382470 1197 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 AC078875.1-201ENST00000431907 724 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 AC007274.1-201ENST00000439805 662 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 AC022217.1-201ENST00000521069 738 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 AP001258.2-201ENST00000529891 490 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 AC003686.1-201ENST00000550956 1034 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 AC090386.2-201ENST00000623010 1039 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 TUBB8P4-201ENST00000511806 1324 ntBASIC14.31□□□□□ -0.12
CFAP99D6REC4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.31□□□□□ -0.12
CFAP99D6REC4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFAP99D6REC4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CFAP99D6REC4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP99D6REC4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP99D6REC4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP99D6REC4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP99D6REC4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CFAP99D6REC4 AC018629.1-201ENST00000623381 1736 ntBASIC14.3□□□□□ -0.12
CFAP99D6REC4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms