Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 PTENP1-202ENST00000532280 3996 ntBASIC14.24□□□□□ -0.13
SPASTQ9UBP0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 KHSRPP1-201ENST00000427983 1768 ntBASIC14.24□□□□□ -0.13
SPASTQ9UBP0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPASTQ9UBP0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 CAP2P1-201ENST00000557743 1390 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 BANF1P3-201ENST00000412556 261 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AP000358.1-201ENST00000456260 156 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 TPT1P11-201ENST00000458482 498 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AC008267.1-201ENST00000474858 1069 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 RN7SL530P-201ENST00000485097 298 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AC027237.1-201ENST00000560942 655 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AC093752.3-201ENST00000567343 901 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 MIR3677-201ENST00000578964 60 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 MIR7845-201ENST00000618396 99 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 COX6A1P2-201ENST00000620597 330 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AC007718.1-201ENST00000621078 280 ntBASIC14.23□□□□□ -0.13
SPASTQ9UBP0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SPASTQ9UBP0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.22□□□□□ -0.13
SPASTQ9UBP0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms