Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 EEF1GP8-201ENST00000506566 1154 ntBASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 GOLGA2P7-209ENST00000560408 745 ntBASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 MIR6746-201ENST00000620971 63 ntBASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DNMT3BQ9UBC3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.71□□□□□ -0.06
DNMT3BQ9UBC3 AC067930.6-201ENST00000623257 4947 ntBASIC14.71□□□□□ -0.06
DNMT3BQ9UBC3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
DNMT3BQ9UBC3 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.71□□□□□ -0.06
DNMT3BQ9UBC3 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.71□□□□□ -0.06
DNMT3BQ9UBC3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DNMT3BQ9UBC3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.71□□□□□ -0.06
DNMT3BQ9UBC3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 AC234644.1-201ENST00000406065 370 ntBASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 RN7SL596P-201ENST00000582123 288 ntBASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 BX640514.1-201ENST00000583223 1918 ntBASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.7□□□□□ -0.06
DNMT3BQ9UBC3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 RPL3P2-204ENST00000413027 1203 ntBASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 HMGA1P1-201ENST00000415560 1062 ntBASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 AC025186.1-201ENST00000478174 870 ntBASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 AC100858.1-201ENST00000514059 1228 ntBASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 AP005264.6-204ENST00000588436 719 ntBASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.69□□□□□ -0.06
DNMT3BQ9UBC3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms