Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 AP000812.2-201ENST00000538934 718 ntBASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 KRT18P8-201ENST00000581937 1246 ntBASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 AC027601.3-201ENST00000622907 509 ntBASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 AP003969.2-201ENST00000623739 2275 ntBASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.37□□□□□ -0.27
AMBRA1Q9C0C7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 AC016694.1-201ENST00000434179 700 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 FAM8A4P-201ENST00000435433 1213 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 AC022210.1-201ENST00000449856 793 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 AL035414.1-201ENST00000451327 857 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 CROCCP4-201ENST00000457096 498 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 FTH1P14-201ENST00000482930 551 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 KRT90P-201ENST00000549264 1064 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 AP005482.1-201ENST00000563722 1273 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 AC133552.6-201ENST00000613406 534 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AMBRA1Q9C0C7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms