Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.44□□□□□ -0.1
SEMA3CQ99985 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.44□□□□□ -0.1
SEMA3CQ99985 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.44□□□□□ -0.1
SEMA3CQ99985 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.44□□□□□ -0.1
SEMA3CQ99985 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.44□□□□□ -0.1
SEMA3CQ99985 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SEMA3CQ99985 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.44□□□□□ -0.1
SEMA3CQ99985 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.44□□□□□ -0.1
SEMA3CQ99985 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.44□□□□□ -0.1
SEMA3CQ99985 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.44□□□□□ -0.1
SEMA3CQ99985 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SEMA3CQ99985 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 SHMT1P1-201ENST00000419974 1312 ntBASIC14.43□□□□□ -0.1
SEMA3CQ99985 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 MEG3_2.1-201ENST00000611456 105 ntBASIC14.43□□□□□ -0.1
SEMA3CQ99985 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 AC008132.1-202ENST00000342005 1389 ntBASIC14.43□□□□□ -0.1
SEMA3CQ99985 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SEMA3CQ99985 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SEMA3CQ99985 AC131212.3-201ENST00000624087 4219 ntBASIC14.42□□□□□ -0.1
SEMA3CQ99985 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SEMA3CQ99985 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.42□□□□□ -0.1
SEMA3CQ99985 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms