Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC113935.1-201ENST00000471722 555 ntBASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 KRT8P1-201ENST00000557533 1207 ntBASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AC020917.4-201ENST00000623994 1999 ntBASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 AGAP12P-201ENST00000585227 2359 ntBASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.85□□□□□ -0.19
PDLIM5Q96HC4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 AC006987.1-201ENST00000413610 527 ntBASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 AL033527.4-201ENST00000641026 673 ntBASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.84□□□□□ -0.19
PDLIM5Q96HC4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.83□□□□□ -0.19
PDLIM5Q96HC4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.83□□□□□ -0.19
PDLIM5Q96HC4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
PDLIM5Q96HC4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.83□□□□□ -0.19
PDLIM5Q96HC4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.19
PDLIM5Q96HC4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
PDLIM5Q96HC4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PDLIM5Q96HC4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.83□□□□□ -0.19
PDLIM5Q96HC4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM5Q96HC4 AC093462.1-201ENST00000621167 1683 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms