Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 TCEA1-206ENST00000520534 635 ntTSL 2 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 SPEF2-201ENST00000282469 3026 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 ZPR1-201ENST00000227322 6566 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 SLC8A1-202ENST00000402441 3065 ntTSL 2 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 SLC9A7P1-202ENST00000556476 2239 ntBASIC8.43□□□□□ -1.06
SVIPQ8NHG7 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 TCP11L2-202ENST00000546625 3198 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 AC130456.1-201ENST00000565085 1363 ntBASIC8.43□□□□□ -1.06
SVIPQ8NHG7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 PAN2-221ENST00000610546 5301 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 LAS1L-203ENST00000374811 2439 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 KRT18P55-202ENST00000578578 1546 ntBASIC8.43□□□□□ -1.06
SVIPQ8NHG7 ZNF543-201ENST00000321545 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 PLK4-201ENST00000270861 3841 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 KCNMB1-202ENST00000521859 1733 ntTSL 2 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 OR2A20P-201ENST00000479887 2913 ntBASIC8.43□□□□□ -1.06
SVIPQ8NHG7 RPS6KA2-206ENST00000503859 4137 ntTSL 2 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 MEP1A-202ENST00000611727 2971 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC8.43□□□□□ -1.06
SVIPQ8NHG7 EXOSC2-211ENST00000546165 1956 ntTSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 PIK3R1-202ENST00000336483 2439 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AL080251.1-201ENST00000494072 4369 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AL162171.3-201ENST00000617439 3178 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 LINC00346-201ENST00000538077 6265 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 FAM220BP-201ENST00000377689 816 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AC107918.2-201ENST00000530817 355 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 SETP3-201ENST00000581726 813 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AC135178.5-201ENST00000602597 674 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AP000720.2-201ENST00000623429 769 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CNR1-205ENST00000468898 1320 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CSRP1-216ENST00000532460 1469 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 PCDHGB6-201ENST00000520790 4599 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CD300LF-203ENST00000343125 1554 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 MTUS2-AS1-201ENST00000323380 1992 ntTSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 LDHC-207ENST00000541669 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CLCC1-206ENST00000369970 2078 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 LINC00994-201ENST00000485805 2129 ntTSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 CTAGE13P-201ENST00000416709 2446 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AC005154.1-215ENST00000584621 2437 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 NT5C1B-202ENST00000359846 2475 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 AC012640.4-201ENST00000606194 2550 ntBASIC8.42□□□□□ -1.06
SVIPQ8NHG7 ZNF596-202ENST00000320552 2696 ntAPPRIS P1 TSL 4 BASIC8.42□□□□□ -1.06
SVIPQ8NHG7 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms