RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
USP29-201ENST00000254181 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
USP29-201ENST00000254181 MYT1Q01538 1121 aa13.34□□□□□ -0.27
USP29-201ENST00000254181 PRKCSHP14314 528 aaPredicted RBP13.09□□□□□ -0.31
USP29-201ENST00000254181 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
USP29-201ENST00000254181 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
USP29-201ENST00000254181 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
USP29-201ENST00000254181 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
USP29-201ENST00000254181 APLP2Q06481 763 aa12.75□□□□□ -0.37
USP29-201ENST00000254181 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
USP29-201ENST00000254181 HRCP23327 699 aa12.63□□□□□ -0.39
USP29-201ENST00000254181 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
USP29-201ENST00000254181 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
USP29-201ENST00000254181 NCBP3Q53F19 620 aaKnown RBP12.41□□□□□ -0.42
USP29-201ENST00000254181 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
USP29-201ENST00000254181 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
USP29-201ENST00000254181 PCGF6Q9BYE7 350 aa12.32□□□□□ -0.44
USP29-201ENST00000254181 BCL11AQ9H165 835 aa12.21□□□□□ -0.46
USP29-201ENST00000254181 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
USP29-201ENST00000254181 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
USP29-201ENST00000254181 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
USP29-201ENST00000254181 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
USP29-201ENST00000254181 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
USP29-201ENST00000254181 ARXQ96QS3 562 aa12□□□□□ -0.49
USP29-201ENST00000254181 KLHL34Q8N239 644 aa12□□□□□ -0.49
USP29-201ENST00000254181 TULP1O00294 542 aaPredicted RBP11.97□□□□□ -0.49
USP29-201ENST00000254181 FAM9AQ8IZU1 332 aaPredicted RBP11.97□□□□□ -0.49
USP29-201ENST00000254181 ACIN1Q9UKV3 1341 aaKnown RBP11.92□□□□□ -0.5
USP29-201ENST00000254181 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
USP29-201ENST00000254181 NEUROD1Q13562 356 aa11.83□□□□□ -0.52
USP29-201ENST00000254181 PODXL2Q9NZ53 605 aa11.81□□□□□ -0.52
USP29-201ENST00000254181 ZEB1P37275 1124 aaPredicted RBP11.81□□□□□ -0.52
USP29-201ENST00000254181 KCNA4P22459 653 aa11.79□□□□□ -0.52
USP29-201ENST00000254181 HOMEZQ8IX15 550 aa11.73□□□□□ -0.53
USP29-201ENST00000254181 ANP32EQ9BTT0 268 aa11.7□□□□□ -0.54
USP29-201ENST00000254181 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
USP29-201ENST00000254181 CHIC1Q5VXU3 224 aa11.67□□□□□ -0.54
USP29-201ENST00000254181 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
USP29-201ENST00000254181 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
USP29-201ENST00000254181 CSRNP3Q8WYN3 585 aa11.58□□□□□ -0.56
USP29-201ENST00000254181 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
USP29-201ENST00000254181 AEBP2Q6ZN18 517 aaPredicted RBP11.56□□□□□ -0.56
USP29-201ENST00000254181 TRIM26Q12899 539 aaPredicted RBP11.53□□□□□ -0.56
USP29-201ENST00000254181 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
USP29-201ENST00000254181 C14orf37Q86TY3 774 aa11.47□□□□□ -0.57
USP29-201ENST00000254181 DIEXFQ68CQ4 756 aaKnown RBP11.46□□□□□ -0.57
USP29-201ENST00000254181 PDIA4P13667 645 aaKnown RBP11.39□□□□□ -0.59
USP29-201ENST00000254181 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
USP29-201ENST00000254181 BCANQ96GW7 911 aa11.37□□□□□ -0.59
USP29-201ENST00000254181 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
USP29-201ENST00000254181 CCER1Q8TC90 406 aaPredicted RBP11.3□□□□□ -0.6
USP29-201ENST00000254181 CCDC136Q96JN2 1154 aa11.3□□□□□ -0.6
USP29-201ENST00000254181 PDE4CQ08493 712 aa11.27□□□□□ -0.61
USP29-201ENST00000254181 UBE2Q2Q8WVN8 375 aa11.26□□□□□ -0.61
USP29-201ENST00000254181 PKNOX2Q96KN3 472 aa11.23□□□□□ -0.61
USP29-201ENST00000254181 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
USP29-201ENST00000254181 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
USP29-201ENST00000254181 DHX37Q8IY37 1157 aaKnown RBP11.18□□□□□ -0.62
USP29-201ENST00000254181 SHROOM4Q9ULL8 1493 aa11.18□□□□□ -0.62
USP29-201ENST00000254181 NEFLP07196 543 aa11.17□□□□□ -0.62
USP29-201ENST00000254181 CHMP4AQ9BY43 222 aa11.17□□□□□ -0.62
USP29-201ENST00000254181 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
USP29-201ENST00000254181 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
USP29-201ENST00000254181 SALL2Q9Y467 1007 aaPredicted RBP11.14□□□□□ -0.63
USP29-201ENST00000254181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
USP29-201ENST00000254181 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
USP29-201ENST00000254181 DEKP35659 375 aaKnown RBP11.08□□□□□ -0.64
USP29-201ENST00000254181 SUPT16HQ9Y5B9 1047 aaKnown RBP11.08□□□□□ -0.64
USP29-201ENST00000254181 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
USP29-201ENST00000254181 PLCB2Q00722 1185 aa11.05□□□□□ -0.64
USP29-201ENST00000254181 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
USP29-201ENST00000254181 NISCHQ9Y2I1 1504 aa11.04□□□□□ -0.64
USP29-201ENST00000254181 TMEM132AQ24JP5 1023 aa11.02□□□□□ -0.65
USP29-201ENST00000254181 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
USP29-201ENST00000254181 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
USP29-201ENST00000254181 CLSPNQ9HAW4 1339 aa11.01□□□□□ -0.65
USP29-201ENST00000254181 CCDC180Q9P1Z9 1646 aa11□□□□□ -0.65
USP29-201ENST00000254181 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
USP29-201ENST00000254181 MIER1Q8N108 512 aa10.98□□□□□ -0.65
USP29-201ENST00000254181 UBTFP17480 764 aaKnown RBP10.98□□□□□ -0.65
USP29-201ENST00000254181 TAF7LQ5H9L4 462 aa10.98□□□□□ -0.65
USP29-201ENST00000254181 ZNF316A6NFI3 1004 aaPredicted RBP10.98□□□□□ -0.65
USP29-201ENST00000254181 CDK11BP21127 795 aaKnown RBP10.97□□□□□ -0.65
USP29-201ENST00000254181 CDK11AQ9UQ88 783 aaPredicted RBP10.97□□□□□ -0.65
USP29-201ENST00000254181 GLIPR1L2Q4G1C9 344 aa10.97□□□□□ -0.65
USP29-201ENST00000254181 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
USP29-201ENST00000254181 NBR1Q14596 966 aa10.97□□□□□ -0.65
USP29-201ENST00000254181 RBM19Q9Y4C8 960 aaKnown RBP10.96□□□□□ -0.65
USP29-201ENST00000254181 ERICH6BQ5W0A0 696 aa10.96□□□□□ -0.66
USP29-201ENST00000254181 BRD2P25440 801 aaKnown RBP10.94□□□□□ -0.66
USP29-201ENST00000254181 POLR3GLQ9BT43 218 aa10.92□□□□□ -0.66
USP29-201ENST00000254181 A0A0U1RQG5 324 aaPredicted RBP10.9□□□□□ -0.66
USP29-201ENST00000254181 FKBP8Q14318 412 aa10.89□□□□□ -0.67
USP29-201ENST00000254181 CFAP44Q96MT7 982 aa10.88□□□□□ -0.67
USP29-201ENST00000254181 ITGAEP38570 1179 aa10.86□□□□□ -0.67
USP29-201ENST00000254181 FGD1P98174 961 aa10.84□□□□□ -0.67
USP29-201ENST00000254181 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
USP29-201ENST00000254181 IRX6P78412 446 aaPredicted RBP10.81□□□□□ -0.68
USP29-201ENST00000254181 IL27Q8NEV9 243 aa10.8□□□□□ -0.68
USP29-201ENST00000254181 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms