RNA–Protein interactions for RNA: ENST00000617439.1

AL162171.3-201, humanhuman

BASIC

Gene AL162171.3, Length 3,178 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL162171.3-201ENST00000617439 NISCHQ9Y2I1 1504 aa16.84■□□□□ 0.29
AL162171.3-201ENST00000617439 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
AL162171.3-201ENST00000617439 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
AL162171.3-201ENST00000617439 ZCCHC6Q5VYS8 1495 aaKnown RBP14.19□□□□□ -0.14
AL162171.3-201ENST00000617439 DCAF1Q9Y4B6 1507 aa14.06□□□□□ -0.16
AL162171.3-201ENST00000617439 MYO15BQ96JP2 1530 aa13.91□□□□□ -0.18
AL162171.3-201ENST00000617439 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
AL162171.3-201ENST00000617439 NACADO15069 1562 aa13.71□□□□□ -0.22
AL162171.3-201ENST00000617439 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
AL162171.3-201ENST00000617439 ABCC9O60706 1549 aa13.68□□□□□ -0.22
AL162171.3-201ENST00000617439 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
AL162171.3-201ENST00000617439 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
AL162171.3-201ENST00000617439 SCRIBQ14160 1630 aa13.41□□□□□ -0.26
AL162171.3-201ENST00000617439 DCAF8L2P0C7V8 631 aa13.41□□□□□ -0.26
AL162171.3-201ENST00000617439 SHROOM4Q9ULL8 1493 aa13.39□□□□□ -0.27
AL162171.3-201ENST00000617439 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
AL162171.3-201ENST00000617439 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
AL162171.3-201ENST00000617439 PRKCSHP14314 528 aaPredicted RBP13.15□□□□□ -0.3
AL162171.3-201ENST00000617439 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
AL162171.3-201ENST00000617439 CHIC1Q5VXU3 224 aa13.12□□□□□ -0.31
AL162171.3-201ENST00000617439 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
AL162171.3-201ENST00000617439 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
AL162171.3-201ENST00000617439 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
AL162171.3-201ENST00000617439 MROH2BQ7Z745 1585 aa12.97□□□□□ -0.33
AL162171.3-201ENST00000617439 SMARCA4P51532 1647 aa12.97□□□□□ -0.33
AL162171.3-201ENST00000617439 PEG3Q9GZU2 1588 aa12.92□□□□□ -0.34
AL162171.3-201ENST00000617439 WIZO95785 1651 aa12.89□□□□□ -0.35
AL162171.3-201ENST00000617439 SUPT5HO00267 1087 aaKnown RBP12.84□□□□□ -0.35
AL162171.3-201ENST00000617439 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
AL162171.3-201ENST00000617439 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
AL162171.3-201ENST00000617439 TOP2AP11388 1531 aaKnown RBP12.79□□□□□ -0.36
AL162171.3-201ENST00000617439 KCNA4P22459 653 aa12.74□□□□□ -0.37
AL162171.3-201ENST00000617439 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
AL162171.3-201ENST00000617439 SMARCA2P51531 1590 aa12.71□□□□□ -0.38
AL162171.3-201ENST00000617439 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
AL162171.3-201ENST00000617439 TIMELESSQ9UNS1 1208 aa12.68□□□□□ -0.38
AL162171.3-201ENST00000617439 APLP2Q06481 763 aa12.67□□□□□ -0.38
AL162171.3-201ENST00000617439 HMGXB3Q12766 1538 aa12.66□□□□□ -0.38
AL162171.3-201ENST00000617439 NCAPD3P42695 1498 aa12.62□□□□□ -0.39
AL162171.3-201ENST00000617439 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
AL162171.3-201ENST00000617439 BAZ1BQ9UIG0 1483 aaKnown RBP12.55□□□□□ -0.4
AL162171.3-201ENST00000617439 AEBP2Q6ZN18 517 aaPredicted RBP12.54□□□□□ -0.4
AL162171.3-201ENST00000617439 CC2D2AQ9P2K1 1620 aa12.53□□□□□ -0.4
AL162171.3-201ENST00000617439 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
AL162171.3-201ENST00000617439 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
AL162171.3-201ENST00000617439 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
AL162171.3-201ENST00000617439 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
AL162171.3-201ENST00000617439 MYT1Q01538 1121 aa12.44□□□□□ -0.42
AL162171.3-201ENST00000617439 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
AL162171.3-201ENST00000617439 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
AL162171.3-201ENST00000617439 AMER1Q5JTC6 1135 aaPredicted RBP12.4□□□□□ -0.42
AL162171.3-201ENST00000617439 CFTRP13569 1480 aa12.33□□□□□ -0.44
AL162171.3-201ENST00000617439 TTBK1Q5TCY1 1321 aaPredicted RBP12.33□□□□□ -0.44
AL162171.3-201ENST00000617439 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
AL162171.3-201ENST00000617439 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
AL162171.3-201ENST00000617439 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
AL162171.3-201ENST00000617439 BIVM-ERCC5R4GMW8 1640 aa12.28□□□□□ -0.44
AL162171.3-201ENST00000617439 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
AL162171.3-201ENST00000617439 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
AL162171.3-201ENST00000617439 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
AL162171.3-201ENST00000617439 TOP2BQ02880 1626 aa12.23□□□□□ -0.45
AL162171.3-201ENST00000617439 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
AL162171.3-201ENST00000617439 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
AL162171.3-201ENST00000617439 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
AL162171.3-201ENST00000617439 WRNQ14191 1432 aaPredicted RBP eCLIP12.18□□□□□ -0.46
AL162171.3-201ENST00000617439 TPRNQ4KMQ1 711 aa12.18□□□□□ -0.46
AL162171.3-201ENST00000617439 ARXQ96QS3 562 aa12.16□□□□□ -0.46
AL162171.3-201ENST00000617439 PODXL2Q9NZ53 605 aa12.16□□□□□ -0.46
AL162171.3-201ENST00000617439 CUX1P39880 1505 aa12.15□□□□□ -0.46
AL162171.3-201ENST00000617439 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
AL162171.3-201ENST00000617439 NESP48681 1621 aa12.08□□□□□ -0.48
AL162171.3-201ENST00000617439 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
AL162171.3-201ENST00000617439 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
AL162171.3-201ENST00000617439 EEA1Q15075 1411 aa12.07□□□□□ -0.48
AL162171.3-201ENST00000617439 FANCD2Q9BXW9 1451 aa12.07□□□□□ -0.48
AL162171.3-201ENST00000617439 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
AL162171.3-201ENST00000617439 DNMBPQ6XZF7 1577 aa12.06□□□□□ -0.48
AL162171.3-201ENST00000617439 WDR97A6NE52 1622 aa12.02□□□□□ -0.48
AL162171.3-201ENST00000617439 SOGA1O94964 1423 aa12.02□□□□□ -0.49
AL162171.3-201ENST00000617439 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
AL162171.3-201ENST00000617439 KIF21BO75037 1637 aa12□□□□□ -0.49
AL162171.3-201ENST00000617439 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
AL162171.3-201ENST00000617439 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
AL162171.3-201ENST00000617439 URB2Q14146 1524 aaKnown RBP11.98□□□□□ -0.49
AL162171.3-201ENST00000617439 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
AL162171.3-201ENST00000617439 FGD5Q6ZNL6 1462 aa11.95□□□□□ -0.5
AL162171.3-201ENST00000617439 HOMEZQ8IX15 550 aa11.93□□□□□ -0.5
AL162171.3-201ENST00000617439 ABCA10Q8WWZ4 1543 aa11.92□□□□□ -0.5
AL162171.3-201ENST00000617439 WDR62O43379 1518 aa11.92□□□□□ -0.5
AL162171.3-201ENST00000617439 POLA1P09884 1462 aaPredicted RBP11.91□□□□□ -0.5
AL162171.3-201ENST00000617439 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
AL162171.3-201ENST00000617439 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
AL162171.3-201ENST00000617439 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
AL162171.3-201ENST00000617439 PRXQ9BXM0 1461 aa11.9□□□□□ -0.51
AL162171.3-201ENST00000617439 LOC105371045A0A1W2PR82 267 aa11.89□□□□□ -0.51
AL162171.3-201ENST00000617439 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
AL162171.3-201ENST00000617439 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
AL162171.3-201ENST00000617439 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
AL162171.3-201ENST00000617439 KIF27Q86VH2 1401 aa11.86□□□□□ -0.51
AL162171.3-201ENST00000617439 TNIKQ9UKE5 1360 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms