Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AC008894.3-201ENST00000624324 3103 ntBASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 TFAM-201ENST00000373895 973 ntTSL 2 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 FP325317.1-201ENST00000539936 1042 ntBASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 AC103810.4-201ENST00000578601 257 ntBASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC18.09■□□□□ 0.49
COL22A1Q8NFW1 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL22A1Q8NFW1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 AC092384.3-202ENST00000564646 2873 ntBASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 HNRNPA1P55-201ENST00000505935 955 ntBASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 ST3GAL1P1-201ENST00000513810 1014 ntBASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 MIR378I-201ENST00000582688 76 ntBASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
COL22A1Q8NFW1 AC124944.3-201ENST00000607976 1304 ntBASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 AIRN-201ENST00000601203 4374 ntBASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 ERG-211ENST00000453032 1595 ntTSL 2 BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 ALMS1P1-201ENST00000428767 921 ntBASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 IGHV1OR16-3-201ENST00000568138 205 ntBASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 Z82244.1-201ENST00000631502 840 ntBASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL22A1Q8NFW1 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 AL391822.1-201ENST00000452580 562 ntBASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 AC063924.1-201ENST00000546680 673 ntBASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 MYL6-210ENST00000548400 573 ntTSL 3 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 AL117379.1-201ENST00000619319 677 ntBASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL22A1Q8NFW1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms