Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HERC6Q8IVU3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 AC139749.1-202ENST00000617529 3139 ntBASIC15.32■□□□□ 0.04
HERC6Q8IVU3 AC007326.2-201ENST00000624224 7579 ntBASIC15.32■□□□□ 0.04
HERC6Q8IVU3 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 RPL3P5-201ENST00000441645 1232 ntBASIC15.32■□□□□ 0.04
HERC6Q8IVU3 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.32■□□□□ 0.04
HERC6Q8IVU3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 NHP2P1-201ENST00000335274 462 ntBASIC15.31■□□□□ 0.04
HERC6Q8IVU3 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 KRT18P4-201ENST00000422599 1288 ntBASIC15.31■□□□□ 0.04
HERC6Q8IVU3 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 RN7SL288P-201ENST00000490496 291 ntBASIC15.31■□□□□ 0.04
HERC6Q8IVU3 RN7SKP155-201ENST00000516031 288 ntBASIC15.31■□□□□ 0.04
HERC6Q8IVU3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 MIR4265-201ENST00000582152 99 ntBASIC15.31■□□□□ 0.04
HERC6Q8IVU3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.31■□□□□ 0.04
HERC6Q8IVU3 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms