Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.12■□□□□ 0.01
VARS2Q5ST30 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VARS2Q5ST30 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AC015802.1-201ENST00000588104 1449 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 AL121929.2-201ENST00000609691 1432 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AL390755.1-201ENST00000623716 2027 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 PYY2-201ENST00000315776 282 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AC018463.1-201ENST00000456674 917 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 RN7SKP253-201ENST00000516424 309 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 RNA5SP417-201ENST00000516459 108 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 AP003041.2-201ENST00000525666 1180 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 OR5BD1P-201ENST00000532527 817 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AC024267.5-201ENST00000579154 599 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AP000322.3-201ENST00000608665 388 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 AC079416.3-201ENST00000624479 549 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 AL161773.1-201ENST00000624845 863 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AL161772.1-201ENST00000610494 4412 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VARS2Q5ST30 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 AC083899.2-201ENST00000423285 1376 ntBASIC15.11■□□□□ 0.01
VARS2Q5ST30 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
VARS2Q5ST30 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.1■□□□□ 0.01
VARS2Q5ST30 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 RN7SKP109-201ENST00000410592 316 ntBASIC15.1■□□□□ 0.01
VARS2Q5ST30 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 CHCHD2P2-201ENST00000503744 321 ntBASIC15.1■□□□□ 0.01
VARS2Q5ST30 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VARS2Q5ST30 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 CR383656.3-201ENST00000551315 183 ntBASIC15.1■□□□□ 0.01
VARS2Q5ST30 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.1■□□□□ 0.01
VARS2Q5ST30 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms