RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 AEBP2Q6ZN18 517 aaPredicted RBP33.9■■■■□ 3.02
LINC01108-202ENST00000635227 CHIC1Q5VXU3 224 aa33.15■■■□□ 2.9
LINC01108-202ENST00000635227 PHF23Q9BUL5 403 aaPredicted RBP29.23■■■□□ 2.27
LINC01108-202ENST00000635227 SENP3Q9H4L4 574 aaPredicted RBP28.66■■■□□ 2.18
LINC01108-202ENST00000635227 PLPPR3Q6T4P5 718 aa26.94■■□□□ 1.9
LINC01108-202ENST00000635227 FOXD1Q16676 465 aa26.65■■□□□ 1.86
LINC01108-202ENST00000635227 PPP6R1Q9UPN7 881 aa25.77■■□□□ 1.72
LINC01108-202ENST00000635227 ADRA2BP18089 450 aa25.74■■□□□ 1.71
LINC01108-202ENST00000635227 PIAS4Q8N2W9 510 aaPredicted RBP25.14■■□□□ 1.62
LINC01108-202ENST00000635227 MSH5O43196 834 aa24.46■■□□□ 1.51
LINC01108-202ENST00000635227 PPP4R3CPQ6ZMV5 832 aa23.79■■□□□ 1.4
LINC01108-202ENST00000635227 SCAF1Q9H7N4 1312 aaKnown RBP23.43■■□□□ 1.34
LINC01108-202ENST00000635227 KCNA4P22459 653 aa23.4■■□□□ 1.34
LINC01108-202ENST00000635227 MAPK8IP2Q13387 824 aaPredicted RBP23.34■■□□□ 1.33
LINC01108-202ENST00000635227 NCBP3Q53F19 620 aaKnown RBP23.13■■□□□ 1.29
LINC01108-202ENST00000635227 CNKSR2Q8WXI2 1034 aa23.07■■□□□ 1.28
LINC01108-202ENST00000635227 DMRT2Q9Y5R5 561 aa22.91■■□□□ 1.26
LINC01108-202ENST00000635227 NPM3O75607 178 aaKnown RBP22.87■■□□□ 1.25
LINC01108-202ENST00000635227 RNF216Q9NWF9 866 aaPredicted RBP22.59■■□□□ 1.21
LINC01108-202ENST00000635227 HOXD11P31277 338 aaPredicted RBP22.49■■□□□ 1.19
LINC01108-202ENST00000635227 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
LINC01108-202ENST00000635227 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
LINC01108-202ENST00000635227 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
LINC01108-202ENST00000635227 DCAF8L1A6NGE4 600 aa21.94■■□□□ 1.1
LINC01108-202ENST00000635227 EHMT2Q96KQ7 1210 aa21.79■■□□□ 1.08
LINC01108-202ENST00000635227 SLC4A2P04920 1241 aa21.59■■□□□ 1.05
LINC01108-202ENST00000635227 ZBTB22O15209 634 aa21.56■■□□□ 1.04
LINC01108-202ENST00000635227 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
LINC01108-202ENST00000635227 FOXD4L1Q9NU39 408 aa21.44■■□□□ 1.02
LINC01108-202ENST00000635227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.02
LINC01108-202ENST00000635227 U3KPZ7 1027 aaPredicted RBP21.12■□□□□ 0.97
LINC01108-202ENST00000635227 MYCNP04198 464 aaPredicted RBP21.09■□□□□ 0.97
LINC01108-202ENST00000635227 RNF39Q9H2S5 420 aa21.01■□□□□ 0.95
LINC01108-202ENST00000635227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.79■□□□□ 0.92
LINC01108-202ENST00000635227 HNRNPUL2Q1KMD3 747 aaKnown RBP20.79■□□□□ 0.92
LINC01108-202ENST00000635227 SAMD1Q6SPF0 538 aaPredicted RBP20.75■□□□□ 0.91
LINC01108-202ENST00000635227 C1QBPQ07021 282 aaKnown RBP20.73■□□□□ 0.91
LINC01108-202ENST00000635227 ATXN8OSP0DMR3 200 aa20.65■□□□□ 0.9
LINC01108-202ENST00000635227 ATF5Q9Y2D1 282 aaPredicted RBP20.61■□□□□ 0.89
LINC01108-202ENST00000635227 APLP2Q06481 763 aa20.53■□□□□ 0.88
LINC01108-202ENST00000635227 SPINK5Q9NQ38 1064 aaPredicted RBP20.53■□□□□ 0.88
LINC01108-202ENST00000635227 CAPN15O75808 1086 aa20.4■□□□□ 0.86
LINC01108-202ENST00000635227 CACNB1Q02641 598 aaPredicted RBP20.38■□□□□ 0.85
LINC01108-202ENST00000635227 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
LINC01108-202ENST00000635227 ZNF219Q9P2Y4 722 aaPredicted RBP20.28■□□□□ 0.84
LINC01108-202ENST00000635227 ABCB7O75027 752 aa20.06■□□□□ 0.8
LINC01108-202ENST00000635227 DSG3P32926 999 aa20.04■□□□□ 0.8
LINC01108-202ENST00000635227 POLA2Q14181 598 aa20.04■□□□□ 0.8
LINC01108-202ENST00000635227 MKRN4PQ13434 485 aaPredicted RBP19.7■□□□□ 0.74
LINC01108-202ENST00000635227 ZBTB12Q9Y330 459 aaPredicted RBP19.63■□□□□ 0.73
LINC01108-202ENST00000635227 FBLN2P98095 1184 aa19.62■□□□□ 0.73
LINC01108-202ENST00000635227 FKBP8Q14318 412 aa19.4■□□□□ 0.7
LINC01108-202ENST00000635227 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
LINC01108-202ENST00000635227 SPDYE4A6NLX3 237 aa19.26■□□□□ 0.67
LINC01108-202ENST00000635227 SPDYE2BA6NHP3 402 aa19.14■□□□□ 0.65
LINC01108-202ENST00000635227 SPDYE6P0CI01 402 aa19.14■□□□□ 0.65
LINC01108-202ENST00000635227 SPDYE2Q495Y8 402 aa19.14■□□□□ 0.65
LINC01108-202ENST00000635227 ZNF692Q9BU19 519 aaPredicted RBP19.11■□□□□ 0.65
LINC01108-202ENST00000635227 SSUH2Q9Y2M2 353 aa19.04■□□□□ 0.64
LINC01108-202ENST00000635227 RBM42Q9BTD8 480 aaKnown RBP19.02■□□□□ 0.64
LINC01108-202ENST00000635227 PROM2Q8N271 834 aa18.96■□□□□ 0.63
LINC01108-202ENST00000635227 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
LINC01108-202ENST00000635227 AKT1S1Q96B36 256 aa18.84■□□□□ 0.61
LINC01108-202ENST00000635227 REM2Q8IYK8 340 aaPredicted RBP18.69■□□□□ 0.58
LINC01108-202ENST00000635227 FBXO3Q9UK99 471 aa18.61■□□□□ 0.57
LINC01108-202ENST00000635227 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
LINC01108-202ENST00000635227 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.56
LINC01108-202ENST00000635227 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
LINC01108-202ENST00000635227 CLEC11AQ9Y240 323 aa18.5■□□□□ 0.55
LINC01108-202ENST00000635227 VASPP50552 380 aaPredicted RBP18.41■□□□□ 0.54
LINC01108-202ENST00000635227 PRR29P0C7W0 189 aa18.33■□□□□ 0.52
LINC01108-202ENST00000635227 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
LINC01108-202ENST00000635227 MIER1Q8N108 512 aa18.25■□□□□ 0.51
LINC01108-202ENST00000635227 PLCD3Q8N3E9 789 aa18.23■□□□□ 0.51
LINC01108-202ENST00000635227 IFNLR1Q8IU57 520 aaPredicted RBP18.2■□□□□ 0.5
LINC01108-202ENST00000635227 CREBZFQ9NS37 354 aa18.16■□□□□ 0.5
LINC01108-202ENST00000635227 FXR2P51116 673 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC01108-202ENST00000635227 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
LINC01108-202ENST00000635227 PLEKHG5O94827 1062 aa18.07■□□□□ 0.48
LINC01108-202ENST00000635227 KLHL34Q8N239 644 aa18.06■□□□□ 0.48
LINC01108-202ENST00000635227 PIP4P2Q8N4L2 257 aa18.06■□□□□ 0.48
LINC01108-202ENST00000635227 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.48
LINC01108-202ENST00000635227 MNX1P50219 401 aaPredicted RBP18■□□□□ 0.47
LINC01108-202ENST00000635227 ZBTB47Q9UFB7 747 aaPredicted RBP17.96■□□□□ 0.47
LINC01108-202ENST00000635227 SPOCK2Q92563 424 aa17.91■□□□□ 0.46
LINC01108-202ENST00000635227 FARP1Q9Y4F1 1045 aaPredicted RBP17.88■□□□□ 0.45
LINC01108-202ENST00000635227 RTN4Q9NQC3 1192 aaKnown RBP17.85■□□□□ 0.45
LINC01108-202ENST00000635227 AMER1Q5JTC6 1135 aaPredicted RBP17.81■□□□□ 0.44
LINC01108-202ENST00000635227 NPM1P06748 294 aaKnown RBP eCLIP17.79■□□□□ 0.44
LINC01108-202ENST00000635227 NUBP1P53384 320 aa17.79■□□□□ 0.44
LINC01108-202ENST00000635227 RASEFQ8IZ41 740 aa17.71■□□□□ 0.43
LINC01108-202ENST00000635227 CIZ1Q9ULV3 898 aaPredicted RBP17.64■□□□□ 0.41
LINC01108-202ENST00000635227 PKD2Q13563 968 aa17.63■□□□□ 0.41
LINC01108-202ENST00000635227 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
LINC01108-202ENST00000635227 FAM212AQ96EL1 285 aa17.6■□□□□ 0.41
LINC01108-202ENST00000635227 TSPYL2Q9H2G4 693 aaPredicted RBP17.57■□□□□ 0.4
LINC01108-202ENST00000635227 GSE1Q14687 1217 aa17.56■□□□□ 0.4
LINC01108-202ENST00000635227 POTEHQ6S545 545 aa17.55■□□□□ 0.4
LINC01108-202ENST00000635227 CD44P16070 742 aaKnown RBP17.5■□□□□ 0.39
LINC01108-202ENST00000635227 C19orf67A6NJJ6 358 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms