Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S2P59780 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
AP3S2P59780 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.26□□□□□ -0.45
AP3S2P59780 GPS2P2-201ENST00000430745 888 ntBASIC12.26□□□□□ -0.45
AP3S2P59780 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S2P59780 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.26□□□□□ -0.45
AP3S2P59780 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.26□□□□□ -0.45
AP3S2P59780 ALG3P1-201ENST00000508806 1114 ntBASIC12.26□□□□□ -0.45
AP3S2P59780 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.26□□□□□ -0.45
AP3S2P59780 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AP3S2P59780 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.26□□□□□ -0.45
AP3S2P59780 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
AP3S2P59780 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 TEX28P1-201ENST00000613479 1221 ntBASIC12.26□□□□□ -0.45
AP3S2P59780 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
AP3S2P59780 TEX28P2-201ENST00000617764 1221 ntBASIC12.26□□□□□ -0.45
AP3S2P59780 AC002472.3-201ENST00000640124 621 ntBASIC12.26□□□□□ -0.45
AP3S2P59780 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 HLA-A-201ENST00000376802 1334 ntBASIC12.26□□□□□ -0.45
AP3S2P59780 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.26□□□□□ -0.45
AP3S2P59780 AC009093.10-201ENST00000641956 1442 ntBASIC12.26□□□□□ -0.45
AP3S2P59780 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.26□□□□□ -0.45
AP3S2P59780 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
AP3S2P59780 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.26□□□□□ -0.45
AP3S2P59780 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
AP3S2P59780 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
AP3S2P59780 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
AP3S2P59780 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
AP3S2P59780 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 AC022364.1-202ENST00000617468 2409 ntBASIC12.25□□□□□ -0.45
AP3S2P59780 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
AP3S2P59780 AC023274.1-201ENST00000418278 595 ntBASIC12.25□□□□□ -0.45
AP3S2P59780 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.25□□□□□ -0.45
AP3S2P59780 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.25□□□□□ -0.45
AP3S2P59780 PUDPP3-201ENST00000445368 636 ntBASIC12.25□□□□□ -0.45
AP3S2P59780 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
AP3S2P59780 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.25□□□□□ -0.45
AP3S2P59780 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms