Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 HSPA7-201ENST00000445535 1927 ntBASIC15.66■□□□□ 0.1
RFC5P40937 AL139158.3-201ENST00000641212 1562 ntBASIC15.66■□□□□ 0.1
RFC5P40937 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC5P40937 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC5P40937 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RFC5P40937 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 AC010327.5-201ENST00000586923 3061 ntBASIC15.66■□□□□ 0.1
RFC5P40937 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC5P40937 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC5P40937 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.66■□□□□ 0.1
RFC5P40937 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC5P40937 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.66■□□□□ 0.1
RFC5P40937 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RFC5P40937 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 MRPL22P1-201ENST00000505398 616 ntBASIC15.66■□□□□ 0.1
RFC5P40937 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC5P40937 AC087392.5-201ENST00000612517 489 ntBASIC15.66■□□□□ 0.1
RFC5P40937 AC242376.2-201ENST00000619355 883 ntBASIC15.66■□□□□ 0.1
RFC5P40937 AC006372.4-201ENST00000624122 1543 ntBASIC15.66■□□□□ 0.1
RFC5P40937 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.66■□□□□ 0.1
RFC5P40937 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.66■□□□□ 0.1
RFC5P40937 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFC5P40937 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 AC090643.2-201ENST00000623442 2029 ntBASIC15.65■□□□□ 0.1
RFC5P40937 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 HLA-DMA-203ENST00000395305 777 ntBASIC15.65■□□□□ 0.1
RFC5P40937 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 ERP29P1-201ENST00000442902 706 ntBASIC15.65■□□□□ 0.1
RFC5P40937 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.65■□□□□ 0.1
RFC5P40937 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 AC018638.5-201ENST00000450885 754 ntBASIC15.65■□□□□ 0.1
RFC5P40937 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.65■□□□□ 0.1
RFC5P40937 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.65■□□□□ 0.1
RFC5P40937 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.65■□□□□ 0.1
RFC5P40937 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RFC5P40937 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RFC5P40937 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFC5P40937 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RFC5P40937 CICP16-201ENST00000502609 2813 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms