Protein–RNA interactions for Protein: P26992

CNTFR, Ciliary neurotrophic factor receptor subunit alpha, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFRP26992 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
CNTFRP26992 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC11.49□□□□□ -0.57
CNTFRP26992 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CNTFRP26992 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC11.49□□□□□ -0.57
CNTFRP26992 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.49□□□□□ -0.57
CNTFRP26992 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CNTFRP26992 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CNTFRP26992 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.48□□□□□ -0.57
CNTFRP26992 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 AC005014.1-201ENST00000432006 2976 ntBASIC11.48□□□□□ -0.57
CNTFRP26992 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 FAM86MP-201ENST00000340703 885 ntBASIC11.48□□□□□ -0.57
CNTFRP26992 HNRNPA1P32-201ENST00000396326 963 ntBASIC11.48□□□□□ -0.57
CNTFRP26992 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC11.48□□□□□ -0.57
CNTFRP26992 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.48□□□□□ -0.57
CNTFRP26992 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC11.48□□□□□ -0.57
CNTFRP26992 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC11.48□□□□□ -0.57
CNTFRP26992 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.48□□□□□ -0.57
CNTFRP26992 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 AC013355.1-201ENST00000562625 723 ntBASIC11.48□□□□□ -0.57
CNTFRP26992 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.48□□□□□ -0.57
CNTFRP26992 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC11.48□□□□□ -0.57
CNTFRP26992 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 DIO1-215ENST00000610607 796 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 BAP1-211ENST00000615113 489 ntBASIC11.48□□□□□ -0.57
CNTFRP26992 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CNTFRP26992 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CNTFRP26992 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CNTFRP26992 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CNTFRP26992 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.47□□□□□ -0.57
CNTFRP26992 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CNTFRP26992 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms