Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 CES1P1-201ENST00000421606 1704 ntBASIC12.54□□□□□ -0.4
ATF1P18846 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.54□□□□□ -0.4
ATF1P18846 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.54□□□□□ -0.4
ATF1P18846 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.54□□□□□ -0.4
ATF1P18846 PCDHB19P-202ENST00000625133 2914 ntBASIC12.54□□□□□ -0.4
ATF1P18846 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ATF1P18846 AC026271.4-201ENST00000578214 1833 ntBASIC12.54□□□□□ -0.4
ATF1P18846 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.54□□□□□ -0.4
ATF1P18846 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ATF1P18846 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
ATF1P18846 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.54□□□□□ -0.4
ATF1P18846 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.54□□□□□ -0.4
ATF1P18846 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.54□□□□□ -0.4
ATF1P18846 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 AC027601.3-201ENST00000622907 509 ntBASIC12.54□□□□□ -0.4
ATF1P18846 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ATF1P18846 VENTXP1-201ENST00000569334 2716 ntBASIC12.54□□□□□ -0.4
ATF1P18846 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ATF1P18846 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.54□□□□□ -0.4
ATF1P18846 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 AP003969.2-201ENST00000623739 2275 ntBASIC12.54□□□□□ -0.4
ATF1P18846 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ATF1P18846 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
ATF1P18846 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.54□□□□□ -0.4
ATF1P18846 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.53□□□□□ -0.4
ATF1P18846 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 AC060814.4-201ENST00000594169 2163 ntBASIC12.53□□□□□ -0.4
ATF1P18846 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ATF1P18846 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
ATF1P18846 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 AC098614.1-201ENST00000368528 745 ntBASIC12.53□□□□□ -0.4
ATF1P18846 AC005229.1-201ENST00000392885 409 ntBASIC12.53□□□□□ -0.4
ATF1P18846 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.53□□□□□ -0.4
ATF1P18846 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 CRB3P1-201ENST00000449338 276 ntBASIC12.53□□□□□ -0.4
ATF1P18846 CICP12-201ENST00000455801 843 ntBASIC12.53□□□□□ -0.4
ATF1P18846 AL590640.2-201ENST00000457038 527 ntBASIC12.53□□□□□ -0.4
ATF1P18846 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.53□□□□□ -0.4
ATF1P18846 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.53□□□□□ -0.4
ATF1P18846 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 AP003171.2-201ENST00000528208 925 ntBASIC12.53□□□□□ -0.4
ATF1P18846 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.53□□□□□ -0.4
ATF1P18846 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.53□□□□□ -0.4
ATF1P18846 MIR4683-201ENST00000579659 81 ntBASIC12.53□□□□□ -0.4
ATF1P18846 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 AC008825.2-201ENST00000603374 718 ntBASIC12.53□□□□□ -0.4
ATF1P18846 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.53□□□□□ -0.4
ATF1P18846 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
ATF1P18846 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ATF1P18846 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.53□□□□□ -0.4
ATF1P18846 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ATF1P18846 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.53□□□□□ -0.4
ATF1P18846 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms