Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL4P13236 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 AC117503.4-201ENST00000623229 1418 ntBASIC13.3□□□□□ -0.28
CCL4P13236 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL4P13236 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL4P13236 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 AC015909.5-201ENST00000624336 2266 ntBASIC13.29□□□□□ -0.28
CCL4P13236 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 AL139158.3-201ENST00000641212 1562 ntBASIC13.29□□□□□ -0.28
CCL4P13236 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCL4P13236 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL4P13236 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL4P13236 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCL4P13236 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 AC244197.1-201ENST00000456494 951 ntBASIC13.29□□□□□ -0.28
CCL4P13236 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.29□□□□□ -0.28
CCL4P13236 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CCL4P13236 CES1P2-201ENST00000566467 1242 ntBASIC13.29□□□□□ -0.28
CCL4P13236 RN7SL556P-201ENST00000582856 298 ntBASIC13.29□□□□□ -0.28
CCL4P13236 AL049840.2-201ENST00000602722 535 ntBASIC13.29□□□□□ -0.28
CCL4P13236 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 LINC02486-201ENST00000604157 3000 ntBASIC13.29□□□□□ -0.28
CCL4P13236 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCL4P13236 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCL4P13236 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
CCL4P13236 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL4P13236 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL4P13236 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCL4P13236 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL4P13236 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL4P13236 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL4P13236 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL4P13236 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCL4P13236 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL4P13236 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CCL4P13236 MIR1301-201ENST00000408518 82 ntBASIC13.28□□□□□ -0.28
CCL4P13236 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL4P13236 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL4P13236 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL4P13236 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC13.28□□□□□ -0.28
CCL4P13236 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL4P13236 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL4P13236 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.28□□□□□ -0.28
CCL4P13236 CYP4F36P-201ENST00000589193 186 ntBASIC13.28□□□□□ -0.28
CCL4P13236 AC006548.2-201ENST00000605217 529 ntBASIC13.28□□□□□ -0.28
CCL4P13236 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.28□□□□□ -0.28
CCL4P13236 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL4P13236 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
CCL4P13236 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 AL109809.1-201ENST00000418979 1367 ntBASIC13.28□□□□□ -0.28
CCL4P13236 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL4P13236 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCL4P13236 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL4P13236 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms