Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.73■□□□□ 0.27
TOP1P11387 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TOP1P11387 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.73■□□□□ 0.27
TOP1P11387 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.73■□□□□ 0.27
TOP1P11387 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.73■□□□□ 0.27
TOP1P11387 AC011474.4-201ENST00000623523 2076 ntBASIC16.73■□□□□ 0.27
TOP1P11387 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TOP1P11387 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TOP1P11387 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.72■□□□□ 0.27
TOP1P11387 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TOP1P11387 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 MIR557-201ENST00000385239 98 ntBASIC16.72■□□□□ 0.27
TOP1P11387 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TOP1P11387 AL583805.1-201ENST00000391389 531 ntBASIC16.72■□□□□ 0.27
TOP1P11387 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.72■□□□□ 0.27
TOP1P11387 MAGEA5-201ENST00000446757 942 ntBASIC16.72■□□□□ 0.27
TOP1P11387 EEF1DP6-201ENST00000449232 372 ntBASIC16.72■□□□□ 0.27
TOP1P11387 DUTP3-201ENST00000450025 415 ntBASIC16.72■□□□□ 0.27
TOP1P11387 AP000358.1-201ENST00000456260 156 ntBASIC16.72■□□□□ 0.27
TOP1P11387 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.72■□□□□ 0.27
TOP1P11387 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.72■□□□□ 0.27
TOP1P11387 AC016629.1-201ENST00000596579 586 ntBASIC16.72■□□□□ 0.27
TOP1P11387 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.72■□□□□ 0.27
TOP1P11387 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.72■□□□□ 0.27
TOP1P11387 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
TOP1P11387 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 MST1P2-201ENST00000457982 2291 ntBASIC16.72■□□□□ 0.27
TOP1P11387 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.72■□□□□ 0.27
TOP1P11387 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 AC007952.5-201ENST00000572818 1486 ntBASIC16.72■□□□□ 0.27
TOP1P11387 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.72■□□□□ 0.27
TOP1P11387 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.72■□□□□ 0.27
TOP1P11387 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.72■□□□□ 0.27
TOP1P11387 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TOP1P11387 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP1P11387 LINC00115-201ENST00000473798 1317 ntBASIC16.71■□□□□ 0.27
TOP1P11387 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TOP1P11387 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.71■□□□□ 0.27
TOP1P11387 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.71■□□□□ 0.27
TOP1P11387 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP1P11387 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TOP1P11387 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TOP1P11387 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.71■□□□□ 0.27
TOP1P11387 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.71■□□□□ 0.27
TOP1P11387 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP1P11387 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.71■□□□□ 0.27
TOP1P11387 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.71■□□□□ 0.27
TOP1P11387 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP1P11387 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.71■□□□□ 0.27
TOP1P11387 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TOP1P11387 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP1P11387 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.71■□□□□ 0.27
TOP1P11387 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.71■□□□□ 0.27
TOP1P11387 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TOP1P11387 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TOP1P11387 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TOP1P11387 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TOP1P11387 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TOP1P11387 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TOP1P11387 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TOP1P11387 TUBB8P4-201ENST00000511806 1324 ntBASIC16.7■□□□□ 0.26
TOP1P11387 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TOP1P11387 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms