Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AL031673.1-201ENST00000611460 466 ntBASIC15.83■□□□□ 0.12
CYP3A4P08684 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CYP3A4P08684 COX6A1P2-201ENST00000620597 330 ntBASIC15.83■□□□□ 0.12
CYP3A4P08684 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CYP3A4P08684 AL161773.1-201ENST00000624845 863 ntBASIC15.83■□□□□ 0.12
CYP3A4P08684 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CYP3A4P08684 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.83■□□□□ 0.12
CYP3A4P08684 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CYP3A4P08684 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.83■□□□□ 0.12
CYP3A4P08684 AC023794.5-201ENST00000564380 2157 ntBASIC15.83■□□□□ 0.12
CYP3A4P08684 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CYP3A4P08684 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.83■□□□□ 0.12
CYP3A4P08684 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.83■□□□□ 0.12
CYP3A4P08684 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CYP3A4P08684 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CYP3A4P08684 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 PES1P2-201ENST00000449745 1735 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CYP3A4P08684 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CYP3A4P08684 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.82■□□□□ 0.12
CYP3A4P08684 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.82■□□□□ 0.12
CYP3A4P08684 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CYP3A4P08684 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.82■□□□□ 0.12
CYP3A4P08684 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 RNVU1-8-201ENST00000364272 125 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CYP3A4P08684 SNORA50C-201ENST00000408535 133 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 RPSAP31-201ENST00000416648 895 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.82■□□□□ 0.12
CYP3A4P08684 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 AC005722.1-201ENST00000431878 964 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 RPL7P35-201ENST00000446943 740 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.82■□□□□ 0.12
CYP3A4P08684 RPS2P36-201ENST00000456516 831 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.82■□□□□ 0.12
CYP3A4P08684 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.82■□□□□ 0.12
CYP3A4P08684 AC135983.4-201ENST00000564116 1262 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.82■□□□□ 0.12
CYP3A4P08684 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.82■□□□□ 0.12
CYP3A4P08684 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.82■□□□□ 0.12
CYP3A4P08684 AC140113.1-201ENST00000603467 169 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 AC005041.3-201ENST00000606287 649 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.82■□□□□ 0.12
CYP3A4P08684 SNORA50.1-201ENST00000628590 135 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CYP3A4P08684 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CYP3A4P08684 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.82■□□□□ 0.12
CYP3A4P08684 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 NRADDP-202ENST00000641269 1585 ntBASIC15.82■□□□□ 0.12
CYP3A4P08684 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CYP3A4P08684 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.82■□□□□ 0.12
CYP3A4P08684 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.82■□□□□ 0.12
CYP3A4P08684 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.82■□□□□ 0.12
CYP3A4P08684 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CYP3A4P08684 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.81■□□□□ 0.12
CYP3A4P08684 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.81■□□□□ 0.12
CYP3A4P08684 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CYP3A4P08684 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CYP3A4P08684 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CYP3A4P08684 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms